Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19306	Capn2	calpain 2	1		12334
Gene Ontology	calcium ion binding | calpain activity | calpain activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | intracellular | proteolysis and peptidolysis
Human Homolog	CAPN2[calpain 2, (m/II) large subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 18 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGTACTCTGT 1.6 0.0016 Cb medulloblastoma CTTGCTTCCA (3) 2.3 0.0023 P8 GC+1d culture CTTGCTTCCA (3) 2.3 0.0023 P8 GC+SHH+1d culture CTTGCTTCCA (3) 2.3 0.0023 3T3 fibroblasts CGTACTCTGT CTTGCTTCCA (3) 10.5 0.0105 E15 cortex CTTGCTTCCA (3) 4.9 0.0049 P1 cortex CTTGCTTCCA (3) 9.1 0.0091 Hypothalamus CTTGCTTCCA (3) 3.6 0.0036 E16.5 retina CTTGCTTCCA (3) 1.8 0.0018 E18.5 retina AGGGGGACTT CTTGCTTCCA (3) 7.3 0.0073 P0.5 retina AGGGGGACTT CTTGCTTCCA (3) 5.9 0.0059 P2.5 retina CTTGCTTCCA (3) 3.5 0.0035 P4.5 retina CGTACTCTGT 2 0.002 P10.5 crx- retina CTTGCTTCCA (3) 1.9 0.0019 ONL AGGGGGACTT 1.9 0.0019