Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.193099 Fn1fibronectin 1 1  1 36.1 cM  14268 
 Gene Ontology acute-phase response | cell adhesion | cell-substrate junction assembly | extracellular | extracellular matrix | extracellular space | heparin binding | metabolism | oxidoreductase activity | protein binding | wound healing
 Human Homolog FN1[fibronectin 1]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 192 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAAAAAAAAAA (658)203.90.2039
P8 Cb GCCCAACGCTTT (2)11.40.0114
P8 Cb GCCAGGGTGGGG (2)6.50.0065
P8 Cb GCCAAGTTGGTC (3)4.90.0049
P8 Cb GCAAAGAATTCA (9)1.60.0016
P8 Cb GCACCGATGGCT (2)1.60.0016
P8 Cb GCACTAGCTTGG (4)1.60.0016
P8 Cb GCCTTCACCTTC (3)1.60.0016
P8 Cb GCGCCTGTGGTG (2)1.60.0016
Cb medulloblastomaAAAAAAAAAA (658)797.80.7978
Cb medulloblastomaGCTGCCCTGG (12)6.90.0069
Cb medulloblastomaAAAGAATTCA (9)4.60.0046
Cb medulloblastomaCCAACGCTTT (2)4.60.0046
Cb medulloblastomaCAAGTTGGTC (3)2.30.0023
Cb medulloblastomaGGCTGTGGCT (4)2.30.0023
Cb medulloblastomaTTTTTGGGGA (5)2.30.0023
P8 GC+1d cultureAAAAAAAAAA (658)204.30.2043
P8 GC+1d cultureGCCCTGGGGC (7)10.30.0103
P8 GC+1d cultureCCAACGCTTT (2)6.80.0068
P8 GC+1d cultureTTTTTGGGGA (5)5.70.0057
P8 GC+1d cultureCAAGTTGGTC (3)3.40.0034
P8 GC+1d cultureGCCTGTGGTG (2)3.40.0034
P8 GC+1d cultureCAGGGTGGGG (2)2.30.0023
P8 GC+1d cultureGCTGCCCTGG (12)2.30.0023
P8 GC+1d cultureTCTTTAATCC (30)2.30.0023
P8 GC+1d cultureAAAGAATTCA (9)1.10.0011
P8 GC+1d cultureACTAGCTTGG (4)1.10.0011
P8 GC+1d cultureGCAGGCTGCC (3)1.10.0011
P8 GC+1d cultureGGCTGTGGCT (4)1.10.0011
P8 GC+1d cultureGGTCTCAGCC (5)1.10.0011
P8 GC+1d cultureTACTGAATGC (2)1.10.0011
P8 GC+1d cultureTTCCGGGCCT (2)1.10.0011
P8 GC+SHH+1d cultureAAAAAAAAAA (658)278.70.2787
P8 GC+SHH+1d cultureCCAACGCTTT (2)4.70.0047
P8 GC+SHH+1d cultureTCTTTAATCC (30)4.70.0047
P8 GC+SHH+1d cultureCAGGGTGGGG (2)2.30.0023
P8 GC+SHH+1d cultureCTTCACCTTC (3)2.30.0023
P8 GC+SHH+1d cultureGCAGGCTGCC (3)2.30.0023
P8 GC+SHH+1d cultureGCCTGTGGTG (2)2.30.0023
P8 GC+SHH+1d cultureTTCCGGGCCT (2)2.30.0023
P8 GC+SHH+1d cultureTTTTTGGGGA (5)2.30.0023
P8 GC+SHH+1d cultureAAAGAATTCA (9)1.20.0012
P8 GC+SHH+1d cultureCAAGTTGGTC (3)1.20.0012
P8 GC+SHH+1d cultureGCCCTGGGGC (7)1.20.0012
P8 GC+SHH+1d cultureGCTGCCCTGG (12)1.20.0012
P8 GC+SHH+1d cultureGGCTGTGGCT (4)1.20.0012
3T3 fibroblastsCCAACGCTTT (2)45.60.0456
3T3 fibroblastsGCCCTGGGGC (7)31.50.0315
3T3 fibroblastsAAAAAAAAAA (658)280.028
3T3 fibroblastsGGTCTCAGCC (5)70.007
3T3 fibroblastsTCTTTAATCC (30)70.007
3T3 fibroblastsACCGATGGCT (2)3.50.0035
3T3 fibroblastsCAAGTTGGTC (3)3.50.0035
3T3 fibroblastsGCTGCCCTGG (12)3.50.0035
E15 cortexAAAAAAAAAA (658)212.80.2128
E15 cortexGCCTGTGGTG (2)34.60.0346
E15 cortexGGTCTCAGCC (5)14.80.0148
E15 cortexACCGATGGCT (2)4.90.0049
E15 cortexCAAGTTGGTC (3)4.90.0049
E15 cortexCAGGGTGGGG (2)4.90.0049
E15 cortexCCAACGCTTT (2)4.90.0049
E15 cortexGCCCTGGGGC (7)4.90.0049
E15 cortexGCTGCCCTGG (12)4.90.0049
E15 cortexGTGGCCACCA4.90.0049
E15 cortexTCTTTAATCC (30)4.90.0049
P1 cortexAAAAAAAAAA (658)245.40.2454
P1 cortexGCCTGTGGTG (2)27.30.0273
P1 cortexTCTTTAATCC (30)9.10.0091
P1 cortexACTAGCTTGG (4)4.50.0045
P1 cortexGCCCTGGGGC (7)4.50.0045
HypothalamusAAAAAAAAAA (658)123.20.1232
HypothalamusGCCTGTGGTG (2)14.50.0145
HypothalamusGCCCTGGGGC (7)7.20.0072
HypothalamusGGAACCAACA (4)5.40.0054
HypothalamusGGTCTCAGCC (5)5.40.0054
HypothalamusTTTTTGGGGA (5)5.40.0054
HypothalamusCAGGGTGGGG (2)3.60.0036
HypothalamusCTTCACCTTC (3)3.60.0036
HypothalamusAAAGAATTCA (9)1.80.0018
HypothalamusCAAGTTGGTC (3)1.80.0018
HypothalamusGCTGCCCTGG (12)1.80.0018
HypothalamusGGCCAAAGGG (6)1.80.0018
HypothalamusTGGTCACCTG (7)1.80.0018
E12.5 retinaAAAAAAAAAA (658)138.90.1389
E12.5 retinaCCAACGCTTT (2)16.90.0169
E12.5 retinaCAGGGTGGGG (2)3.80.0038
E12.5 retinaCTTCACCTTC (3)3.80.0038
E12.5 retinaGCCCTGGGGC (7)3.80.0038
E12.5 retinaAAAGAATTCA (9)1.90.0019
E12.5 retinaCAAGTTGGTC (3)1.90.0019
E14.5 retinaAAAAAAAAAA (658)94.70.0947
E14.5 retinaTCTTTAATCC (30)21.90.0219
E14.5 retinaCCAACGCTTT (2)7.30.0073
E14.5 retinaCAAGTTGGTC (3)3.60.0036
E14.5 retinaTGTCTCATTG (2)3.60.0036
E14.5 retinaACTAGCTTGG (4)1.80.0018
E14.5 retinaGCCTGTGGTG (2)1.80.0018
E14.5 retinaGCTGCCCTGG (12)1.80.0018
E16.5 retinaAAAAAAAAAA (658)43.50.0435
E16.5 retinaTCTTTAATCC (30)9.10.0091
E16.5 retinaCCAACGCTTT (2)5.40.0054
E16.5 retinaGGTCTCAGCC (5)5.40.0054
E16.5 retinaGCCCTGGGGC (7)1.80.0018
E16.5 retinaGCCTGTGGTG (2)1.80.0018
E16.5 retinaGCTGCCCTGG (12)1.80.0018
E16.5 retinaGGAACCAACA (4)1.80.0018
E16.5 retinaTACTGAATGC (2)1.80.0018
E16.5 retinaTTTTTGGGGA (5)1.80.0018
E18.5 retinaAAAAAAAAAA (658)374.70.3747
E18.5 retinaCCAACGCTTT (2)7.30.0073
E18.5 retinaAAAGAATTCA (9)1.80.0018
E18.5 retinaCAAGTTGGTC (3)1.80.0018
E18.5 retinaTCTTTAATCC (30)1.80.0018
P0.5 retinaAAAAAAAAAA (658)117.80.1178
P0.5 retinaGCCCTGGGGC (7)7.90.0079
P0.5 retinaTTTTTGGGGA (5)7.90.0079
P0.5 retinaGCCTGTGGTG (2)5.90.0059
P0.5 retinaACTAGCTTGG (4)3.90.0039
P0.5 retinaGGAACCAACA (4)3.90.0039
P0.5 retinaAAAGAATTCA (9)20.002
P0.5 retinaCAAGTTGGTC (3)20.002
P0.5 retinaCCAACGCTTT (2)20.002
P0.5 retinaTCTTTAATCC (30)20.002
P2.5 retinaAAAAAAAAAA (658)329.10.3291
P2.5 retinaCCAACGCTTT (2)15.80.0158
P2.5 retinaAAAGAATTCA (9)8.80.0088
P2.5 retinaGCCTGTGGTG (2)5.30.0053
P2.5 retinaGGCCAAAGGG (6)5.30.0053
P2.5 retinaGCTGCCCTGG (12)3.50.0035
P2.5 retinaCAGGGTGGGG (2)1.80.0018
P2.5 retinaGCCCTGGGGC (7)1.80.0018
P2.5 retinaGGAACCAACA (4)1.80.0018
P2.5 retinaTCTTTAATCC (30)1.80.0018
P2.5 retinaTGGTCACCTG (7)1.80.0018
P4.5 retinaAAAAAAAAAA (658)283.30.2833
P4.5 retinaTCTTTAATCC (30)9.90.0099
P4.5 retinaCCAACGCTTT (2)5.90.0059
P4.5 retinaAAAGAATTCA (9)40.004
P4.5 retinaGTGGCCACCA40.004
P4.5 retinaCAAGTTGGTC (3)20.002
P4.5 retinaGCCCTGGGGC (7)20.002
P4.5 retinaGCCTGTGGTG (2)20.002
P4.5 retinaGGAACCAACA (4)20.002
P4.5 retinaGGTCTCAGCC (5)20.002
P6.5 retinaAAAAAAAAAA (658)266.80.2668
P6.5 retinaCCAACGCTTT (2)100.01
P6.5 retinaCAAGTTGGTC (3)8.30.0083
P6.5 retinaACTAGCTTGG (4)3.30.0033
P6.5 retinaAAAGAATTCA (9)1.70.0017
P6.5 retinaGCCCTGGGGC (7)1.70.0017
P6.5 retinaGCCTGTGGTG (2)1.70.0017
P10.5 crx- retinaAAAAAAAAAA (658)44.60.0446
P10.5 crx- retinaGCCTGTGGTG (2)20.40.0204
P10.5 crx- retinaCAAGTTGGTC (3)9.30.0093
P10.5 crx- retinaCCAACGCTTT (2)5.60.0056
P10.5 crx- retinaGCCCTGGGGC (7)5.60.0056
P10.5 crx- retinaAAAGAATTCA (9)1.90.0019
P10.5 crx- retinaACTAGCTTGG (4)1.90.0019
P10.5 crx- retinaGGAACCAACA (4)1.90.0019
P10.5 crx- retinaGGTCTCAGCC (5)1.90.0019
P10.5 crx- retinaTACTGAATGC (2)1.90.0019
P10.5 crx- retinaTCTTTAATCC (30)1.90.0019
P10.5 crx- retinaTGTCTCATTG (2)1.90.0019
P10.5 crx- retinaTTTTTGGGGA (5)1.90.0019
P10.5 crx+ retinaAAAAAAAAAA (658)96.10.0961
P10.5 crx+ retinaCCAACGCTTT (2)7.70.0077
P10.5 crx+ retinaGCCCTGGGGC (7)3.80.0038
P10.5 crx+ retinaGCCTGTGGTG (2)3.80.0038
P10.5 crx+ retinaACTAGCTTGG (4)1.90.0019
P10.5 crx+ retinaCAGGGTGGGG (2)1.90.0019
P10.5 crx+ retinaGGTCTCAGCC (5)1.90.0019
P10.5 crx+ retinaTCTTTAATCC (30)1.90.0019
P10.5 crx+ retinaTGGTCACCTG (7)1.90.0019
Adult retinalAAAAAAAAAA (658)57.40.0574
Adult retinalCAAGTTGGTC (3)11.10.0111
Adult retinalGCCCTGGGGC (7)9.30.0093
Adult retinalTCTTTAATCC (30)7.40.0074
Adult retinalGCGTCAGCTG5.60.0056
Adult retinalCCAACGCTTT (2)3.70.0037
Adult retinalGCTGCCCTGG (12)3.70.0037
Adult retinalAAAGAATTCA (9)1.90.0019
Adult retinalACCGATGGCT (2)1.90.0019
Adult retinalGGTCTCAGCC (5)1.90.0019
Adult retinalTTTTTGGGGA (5)1.90.0019
ONLAAAAAAAAAA (658)103.40.1034
ONLTCTTTAATCC (30)13.40.0134
ONLAAAGAATTCA (9)1.90.0019
ONLCAAGTTGGTC (3)1.90.0019
ONLCTTCACCTTC (3)1.90.0019
ONLGCCCTGGGGC (7)1.90.0019
ONLGCCTGTGGTG (2)1.90.0019
ONLTTTTTGGGGA (5)1.90.0019