| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAGAGAAAA (3) TAAGGCCCTG (4) TGTGTACAGA (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | GTTGGCTATG (3) TGTGTACAGA (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | CCCAGGCCCA (3) GAAGAGAAAA (3) TGTGTACAGA (2)
| 9.1 | 0.0091 |
| P8 GC+SHH+1d culture | GAAGAGAAAA (3) TGTGTACAGA (2) TTTTCTGACA (2)
| 12.9 | 0.0129 |
| 3T3 fibroblasts | GTTGGCTATG (3) TGTGTACAGA (2)
| 7 | 0.007 |
| Hypothalamus | TAAGGCCCTG (4) TGTGTACAGA (2) TTTTCTGACA (2)
| 7.2 | 0.0072 |
| E12.5 retina | GAAGAGAAAA (3)
| 1.9 | 0.0019 |
| E14.5 retina | CCCAGGCCCA (3) GAAGAGAAAA (3) TTTTCTGACA (2)
| 9.1 | 0.0091 |
| E16.5 retina | GAAGAGAAAA (3) GTTGGCTATG (3) TGTGTACAGA (2) TTTTCTGACA (2)
| 9 | 0.009 |
| E18.5 retina | TGTGTACAGA (2) TTTTCTGACA (2)
| 9.1 | 0.0091 |
| P0.5 retina | GAAGAGAAAA (3) TGTGTACAGA (2)
| 11.8 | 0.0118 |
| P2.5 retina | GAAGAGAAAA (3) GTTGGCTATG (3) TGTGTACAGA (2) TTTTCTGACA (2)
| 8.9 | 0.0089 |
| P4.5 retina | GAAGAGAAAA (3) GTTGGCTATG (3)
| 4 | 0.004 |
| P6.5 retina | GAAGAGAAAA (3) GTTGGCTATG (3) TGTGTACAGA (2) TTTTCTGACA (2)
| 10 | 0.01 |
| P10.5 crx- retina | GAAGAGAAAA (3) TGTGTACAGA (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | TAAGGCCCTG (4)
| 1.9 | 0.0019 |
| Adult retinal | GTTGGCTATG (3) TAAGGCCCTG (4) TGTGTACAGA (2) TTTTCTGACA (2)
| 7.6 | 0.0076 |