Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.194462	4633401B06Rik	RIKEN cDNA 4633401B06 gene	3		70828
Mm.194462	Abcd3	ATP-binding cassette, sub-family D (ALD), member 3	3	3 56.6 cM	19299
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of substances | extracellular space | integral to membrane | membrane | mitochondrion | nucleotide binding | peroxisome | peroxisome organization and biogenesis | transport
Human Homolog	ABCD3[ATP-binding cassette, sub-family D (ALD), member 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GTGGCGCACG (61) 13.1 0.0131 P8 Cb GC TCTCCTTAGC (2) 8.2 0.0082 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GTGGCGCACG (61) 6.9 0.0069 Cb medulloblastoma TCTCCTTAGC (2) 6.9 0.0069 Cb medulloblastoma GCACAGTGAT (5) 4.6 0.0046 Cb medulloblastoma GCGGCCTTCA (4) 2.3 0.0023 Cb medulloblastoma TAGATTTCTT (3) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GTGGCGCACG (61) 6.8 0.0068 P8 GC+1d culture TCTCCTTAGC (2) 5.7 0.0057 P8 GC+1d culture TAGATTTCTT (3) 3.4 0.0034 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TCTCCTTAGC (2) 4.7 0.0047 P8 GC+SHH+1d culture GTGGCGCACG (61) 2.3 0.0023 P8 GC+SHH+1d culture GCACAGTGAT (5) 1.2 0.0012 P8 GC+SHH+1d culture GCGGCCTTCA (4) 1.2 0.0012 3T3 fibroblasts GTGGCGCACG (61) 63.1 0.0631 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GCACAGTGAT (5) 10.5 0.0105 3T3 fibroblasts GCGGCCTTCA (4) 7 0.007 3T3 fibroblasts GTGCACAGCA (4) 7 0.007 3T3 fibroblasts TCTCCTTAGC (2) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GTGGCGCACG (61) 113.8 0.1138 E15 cortex GGGAAAGGGG (17) 4.9 0.0049 E15 cortex GTGCACAGCA (4) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GTGGCGCACG (61) 18.2 0.0182 P1 cortex GTAAAACTGA (3) 9.1 0.0091 P1 cortex GTGCACAGCA (4) 4.5 0.0045 P1 cortex TCTCCTTAGC (2) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TCTCCTTAGC (2) 7.2 0.0072 Hypothalamus GTGGCGCACG (61) 3.6 0.0036 Hypothalamus GTAAAACTGA (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GTGGCGCACG (61) 11.3 0.0113 E12.5 retina GCACAGTGAT (5) 5.6 0.0056 E12.5 retina TCTCCTTAGC (2) 5.6 0.0056 E12.5 retina GGGAAAGGGG (17) 3.8 0.0038 E12.5 retina TATGTATGTG (12) 3.8 0.0038 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GTGGCGCACG (61) 29.2 0.0292 E14.5 retina TAGATTTCTT (3) 1.8 0.0018 E14.5 retina TATGTATGTG (12) 1.8 0.0018 E14.5 retina TCTCCTTAGC (2) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GTGGCGCACG (61) 25.4 0.0254 E16.5 retina TCTCCTTAGC (2) 7.2 0.0072 E16.5 retina GGGAAAGGGG (17) 1.8 0.0018 E16.5 retina TATGTATGTG (12) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GTGGCGCACG (61) 10.9 0.0109 E18.5 retina GTAAAACTGA (3) 5.5 0.0055 E18.5 retina GCACAGTGAT (5) 3.6 0.0036 E18.5 retina TAGATTTCTT (3) 1.8 0.0018 E18.5 retina TCTCCTTAGC (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GTGGCGCACG (61) 25.5 0.0255 P0.5 retina GCACAGTGAT (5) 2 0.002 P0.5 retina TATGTATGTG (12) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GTGGCGCACG (61) 17.6 0.0176 P2.5 retina TCTCCTTAGC (2) 7 0.007 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GTGGCGCACG (61) 17.8 0.0178 P4.5 retina GCACAGTGAT (5) 5.9 0.0059 P4.5 retina TCTCCTTAGC (2) 5.9 0.0059 P4.5 retina GTAAAACTGA (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GTGGCGCACG (61) 38.3 0.0383 P6.5 retina TCTCCTTAGC (2) 5 0.005 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GTGGCGCACG (61) 13 0.013 P10.5 crx- retina TATGTATGTG (12) 3.7 0.0037 P10.5 crx- retina TCTCCTTAGC (2) 3.7 0.0037 P10.5 crx- retina GTAAAACTGA (3) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GTGGCGCACG (61) 32.7 0.0327 P10.5 crx+ retina TCTCCTTAGC (2) 7.7 0.0077 P10.5 crx+ retina GCACAGTGAT (5) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GTGGCGCACG (61) 22.2 0.0222 Adult retinal TATGTATGTG (12) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GTGGCGCACG (61) 23 0.023 ONL GCGGCCTTCA (4) 3.8 0.0038