Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.194486	D1Ertd83e	DNA segment, Chr 1, ERATO Doi 83, expressed	1	1 14.0 cM	52079
Mm.194486	AU020177	expressed sequence AU020177	1		98560
Mm.194486	Phf3	PHD finger protein 3	1		213109
Gene Ontology	translation elongation factor activity
Human Homolog	PHF3[PHD finger protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC AAAGTTCTAA (4) 1.6 0.0016 P8 Cb GC ATCTTGTGTT (5) 1.6 0.0016 P8 Cb GC CTTTCTCATT (7) 1.6 0.0016 P8 Cb GC GAAAAGACTG (10) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma AAAGTTCTAA (4) 2.3 0.0023 Cb medulloblastoma AGAAGCAAGA (6) 2.3 0.0023 Cb medulloblastoma CTTTCTCATT (7) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture ACCAACGAAA (3) 2.3 0.0023 P8 GC+1d culture AGAAGCAAGA (6) 1.1 0.0011 P8 GC+1d culture ATCTTGTGTT (5) 1.1 0.0011 P8 GC+1d culture CTTTCTCATT (7) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture ACCAACGAAA (3) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GAGACTGTGT (5) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex AGAAGCAAGA (6) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex AGAAGCAAGA (6) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus ATCTTGTGTT (5) 1.8 0.0018 Hypothalamus GAGACTGTGT (5) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina AGAAGCAAGA (6) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina AAAGTTCTAA (4) 1.8 0.0018 E14.5 retina ATCTTGTGTT (5) 1.8 0.0018 E14.5 retina TGTGTCTTTA (7) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina ATCTTGTGTT (5) 5.4 0.0054 E16.5 retina GAAAAGACTG (10) 3.6 0.0036 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina ACCAACGAAA (3) 1.8 0.0018 E18.5 retina ATCTTGTGTT (5) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina TATCCAGGTA (5) 2 0.002 P0.5 retina TGTGTCTTTA (7) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina TATCCAGGTA (5) 1.8 0.0018 P2.5 retina TGTGTCTTTA (7) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina ATCTTGTGTT (5) 4 0.004 P4.5 retina GAAAAGACTG (10) 2 0.002 P4.5 retina GAGACTGTGT (5) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina AAAGTTCTAA (4) 3.3 0.0033 P6.5 retina ATCTTGTGTT (5) 3.3 0.0033 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina ATCTTGTGTT (5) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina ATCTTGTGTT (5) 3.8 0.0038 P10.5 crx+ retina TATCCAGGTA (5) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GAAAAGACTG (10) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984