Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1949	Col6a2	procollagen, type VI, alpha 2	10	10 41.1 cM	12834
Gene Ontology	cell adhesion | collagen | cytoplasm | extracellular matrix | extracellular matrix structural constituent | extracellular matrix structural constituent conferring tensile strength | extracellular space | phosphate transport | protein binding
Human Homolog	COL6A2[collagen, type VI, alpha 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 23 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCAATGGCC 6.5 0.0065 P8 GC+1d culture CCCAATGGCC GCTCTGTTTG (2) 5.7 0.0057 P8 GC+SHH+1d culture CCCAATGGCC 3.5 0.0035 3T3 fibroblasts CCCAATGGCC GCTCTGTTTG (2) 42 0.042 E15 cortex GGATGTGCTT (2) 4.9 0.0049 Hypothalamus GCTCTGTTTG (2) GGATGTGCTT (2) 3.6 0.0036 E14.5 retina CCCAATGGCC 1.8 0.0018 E16.5 retina GCTCTGTTTG (2) 1.8 0.0018 E18.5 retina CCCAATGGCC 1.8 0.0018 P0.5 retina CCCAATGGCC 3.9 0.0039 P2.5 retina CCCAATGGCC GCTCTGTTTG (2) 3.6 0.0036 P10.5 crx- retina CCCAATGGCC GCTCTGTTTG (2) GGATGTGCTT (2) 14.8 0.0148 P10.5 crx+ retina CCCAATGGCC GCTCTGTTTG (2) GGATGTGCTT (2) 7.6 0.0076 Adult retinal GGATGTGCTT (2) 1.9 0.0019 ONL GGATGTGCTT (2) 1.9 0.0019