Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1956	Nefl	neurofilament, light polypeptide	14	14 28.7 cM	18039
Gene Ontology	intermediate filament | intermediate filament cytoskeleton organization and biogenesis | protein binding | structural molecule activity
Human Homolog	NEFL[neurofilament, light polypeptide 68kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAAAATAG (2) 1.6 0.0016 Cb medulloblastoma GGAAAAATAG (2) 13.9 0.0139 Cb medulloblastoma AGTGAATGCA (2) 4.6 0.0046 Cb medulloblastoma ATAAAAAAAT 2.3 0.0023 Cb medulloblastoma CAGAGCAATA 2.3 0.0023 P8 GC+SHH+1d culture AGTGAATGCA (2) 2.3 0.0023 P8 GC+SHH+1d culture GGAAAAATAG (2) 1.2 0.0012 Hypothalamus GGAAAAATAG (2) 10.9 0.0109 Hypothalamus AGTGAATGCA (2) 9.1 0.0091 Hypothalamus GTAAAGCCAC 1.8 0.0018 Hypothalamus TGTGAAAAGC (2) 1.8 0.0018 E12.5 retina GGAAAAATAG (2) 11.3 0.0113 E12.5 retina AGTGAATGCA (2) 1.9 0.0019 E12.5 retina CTTATGAGTT 1.9 0.0019 E14.5 retina GGAAAAATAG (2) 16.4 0.0164 E14.5 retina AGTGAATGCA (2) 3.6 0.0036 E14.5 retina TGTGAAAAGC (2) 1.8 0.0018 E16.5 retina GGAAAAATAG (2) 19.9 0.0199 E16.5 retina AGTGAATGCA (2) 12.7 0.0127 E18.5 retina GGAAAAATAG (2) 20 0.02 E18.5 retina AGTGAATGCA (2) 3.6 0.0036 E18.5 retina ATAAAAAAAT 3.6 0.0036 P0.5 retina AGTGAATGCA (2) 11.8 0.0118 P0.5 retina GGAAAAATAG (2) 3.9 0.0039 P2.5 retina GGAAAAATAG (2) 7 0.007 P2.5 retina AGTGAATGCA (2) 3.5 0.0035 P2.5 retina CTTATGAGTT 1.8 0.0018 P4.5 retina GGAAAAATAG (2) 11.9 0.0119 P4.5 retina AGTGAATGCA (2) 4 0.004 P6.5 retina AGTGAATGCA (2) 6.7 0.0067 P6.5 retina GGAAAAATAG (2) 6.7 0.0067 P6.5 retina CAGAGCAATA 1.7 0.0017 P6.5 retina TGTGAAAAGC (2) 1.7 0.0017 P10.5 crx- retina GGAAAAATAG (2) 29.7 0.0297 P10.5 crx- retina AGTGAATGCA (2) 27.9 0.0279 P10.5 crx- retina CAGAGCAATA 1.9 0.0019 P10.5 crx- retina TGTGAAAAGC (2) 1.9 0.0019 P10.5 crx+ retina AGTGAATGCA (2) 32.7 0.0327 P10.5 crx+ retina GGAAAAATAG (2) 19.2 0.0192 P10.5 crx+ retina TGTGAAAAGC (2) 3.8 0.0038 P10.5 crx+ retina CTTATGAGTT 1.9 0.0019 Adult retinal AGTGAATGCA (2) 20.4 0.0204 Adult retinal GGAAAAATAG (2) 3.7 0.0037 Adult retinal GTAAAGCCAC 3.7 0.0037 ONL AGTGAATGCA (2) 1.9 0.0019 ONL GGAAAAATAG (2) 1.9 0.0019