Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.195635	Ssbp3	single-stranded DNA binding protein 3	4		72475
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | single-stranded DNA binding | transcription regulator activity
Human Homolog	SSBP3[single stranded DNA binding protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGGATCCC ACACTTTTTG (2) GGGCCTGGCC (2) 9.7 0.0097 Cb medulloblastoma AATGGATCCC ACACTTTTTG (2) 13.8 0.0138 P8 GC+1d culture ACACTTTTTG (2) CAATAAAAAG (4) GGCCTTGGGG (2) TACAATGAAC TACATTGAAG TATATCATAT 17.1 0.0171 P8 GC+SHH+1d culture AATGGATCCC ACACTTTTTG (2) CAATAAAAAG (4) GGCCTTGGGG (2) GGGCCTGGCC (2) TACAATGAAC TATATCATAT 14.2 0.0142 3T3 fibroblasts GGCCTTGGGG (2) 3.5 0.0035 E15 cortex ACACTTTTTG (2) GGCCTTGGGG (2) 19.7 0.0197 P1 cortex ACACTTTTTG (2) TACAATGAAC TATATCATAT 22.7 0.0227 Hypothalamus ACACTTTTTG (2) CAATAAAAAG (4) TATATCATAT 7.2 0.0072 E12.5 retina AAGGACAAAA AATGGATCCC ACACTTTTTG (2) TACAATGAAC 11.4 0.0114 E14.5 retina GGCCTTGGGG (2) TATATCATAT 7.3 0.0073 E16.5 retina AAGGACAAAA ACACTTTTTG (2) CAATAAAAAG (4) GGCCTTGGGG (2) TACATTGAAG TATATCATAT 18 0.018 E18.5 retina ACACTTTTTG (2) CAATAAAAAG (4) TACATTGAAG 10.9 0.0109 P0.5 retina ACACTTTTTG (2) GGCCTTGGGG (2) TACATTGAAG TATATCATAT 11.8 0.0118 P2.5 retina ACACTTTTTG (2) CAATAAAAAG (4) GGCCTTGGGG (2) GGGCCTGGCC (2) TACATTGAAG TATATCATAT 26.4 0.0264 P4.5 retina ACACTTTTTG (2) GGCCTTGGGG (2) TATATCATAT 9.9 0.0099 P6.5 retina CAATAAAAAG (4) GGCCTTGGGG (2) TACATTGAAG 5.1 0.0051 P10.5 crx- retina AAGGACAAAA ACACTTTTTG (2) TACAATGAAC TATATCATAT 9.4 0.0094 P10.5 crx+ retina ACACTTTTTG (2) 9.6 0.0096 ONL TATATCATAT 1.9 0.0019