Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.195776	1110003F10Rik	RIKEN cDNA 1110003F10 gene	5		68476
Mm.195776	2900022L22Rik	RIKEN cDNA 2900022L22 gene	5		76831
Mm.195776	Lias	lipoic acid synthetase	5		79464
Gene Ontology	catalytic activity | iron ion binding | lipoate biosynthesis | lipoate synthase activity | lipoic acid biosynthesis | lipoic acid synthase activity | mitochondrion
Human Homolog	LIAS[lipoic acid synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC CTCGAGGGAA (4) 3.3 0.0033 P8 Cb GC ATAACATTGA (7) 1.6 0.0016 P8 Cb GC TGAAATTTCT (4) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma ATAACATTGA (7) 2.3 0.0023 Cb medulloblastoma TGAAATTTCT (4) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture ATAACATTGA (7) 2.3 0.0023 P8 GC+1d culture TAAACACTGG (5) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture ATAACATTGA (7) 3.5 0.0035 P8 GC+SHH+1d culture CTCGAGGGAA (4) 1.2 0.0012 P8 GC+SHH+1d culture GACTTCTTGC (5) 1.2 0.0012 P8 GC+SHH+1d culture TGAAATTTCT (4) 1.2 0.0012 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 3T3 fibroblasts CAGCCAACGA (4) 3.5 0.0035 3T3 fibroblasts CTCGAGGGAA (4) 3.5 0.0035 3T3 fibroblasts TAAACACTGG (5) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 E15 cortex TGAAATTTCT (4) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex CTCGAGGGAA (4) 4.5 0.0045 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 P1 cortex TGAAATTTCT (4) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus TGAAATTTCT (4) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina CTCGAGGGAA (4) 3.8 0.0038 E12.5 retina ATAACATTGA (7) 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina CAGCCAACGA (4) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina CTCGAGGGAA (4) 3.9 0.0039 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina TGAAATTTCT (4) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina CTCGAGGGAA (4) 2 0.002 P4.5 retina GACTTCTTGC (5) 2 0.002 P4.5 retina TGAAATTTCT (4) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina GACTTCTTGC (5) 3.3 0.0033 P6.5 retina CTCGAGGGAA (4) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina ATAACATTGA (7) 1.9 0.0019 P10.5 crx- retina CAGCCAACGA (4) 1.9 0.0019 P10.5 crx- retina TAAACACTGG (5) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina TGAAATTTCT (4) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal CTCGAGGGAA (4) 3.7 0.0037 Adult retinal TAAACACTGG (5) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL TAAACACTGG (5) 1.9 0.0019