Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196137	1300006N24Rik	RIKEN cDNA 1300006N24 gene	9	9 A3	71766
Human Homolog	RAVER1[RAVER1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TGGCTCAGTC (3) 4.9 0.0049 P8 Cb GC ATAACCCAAA 3.3 0.0033 P8 Cb GC GAACTGAAAA 3.3 0.0033 P8 Cb GC CCCCTGCCTG (3) 1.6 0.0016 P8 Cb GC TGTATGTGAG (5) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma ATAACCCAAA 2.3 0.0023 Cb medulloblastoma GAACTGAAAA 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture ATAACCCAAA 4.6 0.0046 P8 GC+1d culture GAACTGTAAA (3) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture ATAACCCAAA 5.9 0.0059 P8 GC+SHH+1d culture GAACTGAAAA 1.2 0.0012 P8 GC+SHH+1d culture TGTATGTGAG (5) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GAACTGAAAA 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GAACTGAAAA 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CAGTCAAAAA (4) 1.8 0.0018 Hypothalamus GAACTGAAAA 1.8 0.0018 Hypothalamus GAACTGTAAA (3) 1.8 0.0018 Hypothalamus TGTATGTGAG (5) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina ATAACCCAAA 9.4 0.0094 E12.5 retina GAACTGAAAA 5.6 0.0056 E12.5 retina CAGTCAAAAA (4) 1.9 0.0019 E12.5 retina GAACTGTAAA (3) 1.9 0.0019 E12.5 retina TGTATGTGAG (5) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina ATAACCCAAA 3.6 0.0036 E14.5 retina CAGTCAAAAA (4) 1.8 0.0018 E14.5 retina GAACTGTAAA (3) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina ATAACCCAAA 10.9 0.0109 E16.5 retina GAACTGAAAA 5.4 0.0054 E16.5 retina CCCCTGCCTG (3) 1.8 0.0018 E16.5 retina GGGGAGCCAG (4) 1.8 0.0018 E16.5 retina TGTATGTGAG (5) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina ATAACCCAAA 5.5 0.0055 E18.5 retina GAACTGAAAA 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GAACTGAAAA 7.9 0.0079 P0.5 retina GAACTGTAAA (3) 2 0.002 P0.5 retina TGTATGTGAG (5) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina ATAACCCAAA 8.8 0.0088 P2.5 retina GAACTGTAAA (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina ATAACCCAAA 2 0.002 P4.5 retina GAACTGAAAA 2 0.002 P4.5 retina GAACTGTAAA (3) 2 0.002 P4.5 retina TGGCTCAGTC (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina ATAACCCAAA 10 0.01 P6.5 retina GAACTGAAAA 3.3 0.0033 P6.5 retina TGGCTCAGTC (3) 1.7 0.0017 P6.5 retina TGTATGTGAG (5) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GAACTGAAAA 9.3 0.0093 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GAACTGTAAA (3) 1.9 0.0019 P10.5 crx+ retina GGGGAGCCAG (4) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal ATAACCCAAA 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL ATAACCCAAA 3.8 0.0038 ONL CAGTCAAAAA (4) 3.8 0.0038 ONL GAACTGAAAA 3.8 0.0038 ONL CCCCTGCCTG (3) 1.9 0.0019