Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.196153
B230107M02Rik
RIKEN cDNA B230107M02 gene
2
77843
Mm.196153
Rapgef4
Rap guanine nucleotide exchange factor (GEF) 4
2
56508
Mm.196153
6330581N18Rik
RIKEN cDNA 6330581N18 gene
2
319453
Mm.196153
4732447D17Rik
RIKEN cDNA 4732447D17 gene
2
380612
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 28 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATAATTTAAA
ATCTATACAA (
2
)
GAGAATTCCA
4.8
0.0048
P8 GC+1d culture
ATCTATACAA (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
ATAATTTAAA
TTCATAATCT
(
5
)
2.4
0.0024
3T3 fibroblasts
CTGCTGCTCT (
2
)
3.5
0.0035
E15 cortex
GAGAATTCCA
4.9
0.0049
P1 cortex
ATAATTTAAA
CTGCTGCTCT (
2
)
13.6
0.0136
Hypothalamus
ATCTATACAA (
2
)
TTCATAATCT
(
5
)
5.4
0.0054
E12.5 retina
CTGCTGCTCT (
2
)
1.9
0.0019
E14.5 retina
GAGAATTCCA
3.6
0.0036
E16.5 retina
CTGCTGCTCT (
2
)
GAGAATTCCA
7.2
0.0072
E18.5 retina
ATAATTTAAA
GAGAATTCCA
3.6
0.0036
P0.5 retina
GAGAATTCCA
2
0.002
P2.5 retina
ATAATTTAAA
1.8
0.0018
P4.5 retina
ATAATTTAAA
GAGAATTCCA
4
0.004
P6.5 retina
ATAATTTAAA
GAGAATTCCA
TTCATAATCT
(
5
)
5.1
0.0051
P10.5 crx- retina
ATAATTTAAA
TTCATAATCT
(
5
)
3.8
0.0038
Adult retinal
ATAATTTAAA
1.9
0.0019
