Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.196325
AU022537
expressed sequence AU022537
5
100832
Mm.196325
A730098D12Rik
RIKEN cDNA A730098D12 gene
5
231386
Mm.196325
D9Mgi6
DNA Segment, Chr 9, Mouse Genome Informatics 6
9
97542
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAAACTTAA (
6
)
4.9
0.0049
P8 Cb GC
ACTATGATTG (
6
)
1.6
0.0016
P8 Cb GC
ATCAATCCAG (
6
)
1.6
0.0016
P8 Cb GC
CTACTGAACA
(
3
)
1.6
0.0016
P8 Cb GC
GTTAATGCTA
(
5
)
1.6
0.0016
Cb medulloblastoma
GAAAACTTAA (
6
)
4.6
0.0046
P8 GC+1d culture
ACTATGATTG (
6
)
3.4
0.0034
P8 GC+1d culture
GTTAATGCTA
(
5
)
2.3
0.0023
P8 GC+1d culture
CTACTGAACA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GTTAATGCTA
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
GAAAACTTAA (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CTACTGAACA
(
3
)
1.2
0.0012
P1 cortex
CTACTGAACA
(
3
)
9.1
0.0091
Hypothalamus
GAAAACTTAA (
6
)
12.7
0.0127
E12.5 retina
GAAAACTTAA (
6
)
5.6
0.0056
E12.5 retina
GTTAATGCTA
(
5
)
3.8
0.0038
E12.5 retina
CAGTAGAATA
(
3
)
1.9
0.0019
E12.5 retina
CTACTGAACA
(
3
)
1.9
0.0019
E14.5 retina
GAAAACTTAA (
6
)
5.5
0.0055
E14.5 retina
GTTAATGCTA
(
5
)
3.6
0.0036
E16.5 retina
GAAAACTTAA (
6
)
9.1
0.0091
E16.5 retina
CTACTGAACA
(
3
)
1.8
0.0018
E16.5 retina
GTTAATGCTA
(
5
)
1.8
0.0018
E18.5 retina
GAAAACTTAA (
6
)
10.9
0.0109
E18.5 retina
CTACTGAACA
(
3
)
3.6
0.0036
P0.5 retina
GTTAATGCTA
(
5
)
9.8
0.0098
P0.5 retina
GAAAACTTAA (
6
)
3.9
0.0039
P0.5 retina
CTACTGAACA
(
3
)
2
0.002
P2.5 retina
GAAAACTTAA (
6
)
7
0.007
P2.5 retina
GTTAATGCTA
(
5
)
7
0.007
P2.5 retina
CTACTGAACA
(
3
)
5.3
0.0053
P4.5 retina
GAAAACTTAA (
6
)
9.9
0.0099
P4.5 retina
CTACTGAACA
(
3
)
4
0.004
P4.5 retina
GTTAATGCTA
(
5
)
4
0.004
P6.5 retina
GTTAATGCTA
(
5
)
6.7
0.0067
P6.5 retina
CTACTGAACA
(
3
)
1.7
0.0017
P6.5 retina
GAAAACTTAA (
6
)
1.7
0.0017
P10.5 crx- retina
GTTAATGCTA
(
5
)
1.9
0.0019
P10.5 crx+ retina
GAAAACTTAA (
6
)
3.8
0.0038
P10.5 crx+ retina
GTTAATGCTA
(
5
)
3.8
0.0038
P10.5 crx+ retina
CAGTAGAATA
(
3
)
1.9
0.0019
Adult retinal
CAGTAGAATA
(
3
)
5.6
0.0056
Adult retinal
CTACTGAACA
(
3
)
1.9
0.0019
ONL
GTTAATGCTA
(
5
)
1.9
0.0019
