Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196577	AA409289	expressed sequence AA409289	17		106484
Mm.196577	D17Wsu92e	DNA segment, Chr 17, Wayne State University 92, expressed	17	17 13.0 cM	224647
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCCGGCGCC (4) 11.4 0.0114 P8 Cb GC TGCACACACA (29) 8.2 0.0082 P8 Cb GC GTGACTACGG (2) 1.6 0.0016 Cb medulloblastoma ATCCGGCGCC (4) 9.2 0.0092 Cb medulloblastoma TGCTGCCAGA (4) 4.6 0.0046 Cb medulloblastoma TGAGTGTGTG (7) 2.3 0.0023 Cb medulloblastoma TGCACACACA (29) 2.3 0.0023 P8 GC+1d culture ATCCGGCGCC (4) 19.4 0.0194 P8 GC+1d culture TGCACACACA (29) 9.1 0.0091 P8 GC+1d culture AGCTTCCAGC (3) 4.6 0.0046 P8 GC+1d culture AGCTTCCACC (2) 2.3 0.0023 P8 GC+1d culture AAAAATTAAT (4) 1.1 0.0011 P8 GC+1d culture TGCTGCCAGA (4) 1.1 0.0011 P8 GC+SHH+1d culture TGCACACACA (29) 16.4 0.0164 P8 GC+SHH+1d culture ATCCGGCGCC (4) 4.7 0.0047 P8 GC+SHH+1d culture AGCTTCCAGC (3) 2.3 0.0023 P8 GC+SHH+1d culture AGCTTCCACC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGCTGCCAGA (4) 1.2 0.0012 3T3 fibroblasts ATCCGGCGCC (4) 56.1 0.0561 3T3 fibroblasts TGCACACACA (29) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts AGCTTCCAGC (3) 3.5 0.0035 E15 cortex ATCCGGCGCC (4) 34.6 0.0346 E15 cortex AGGCCAAGGA (3) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGCTGCCAGA (4) 4.9 0.0049 P1 cortex ATCCGGCGCC (4) 9.1 0.0091 P1 cortex AGCTTCCAGC (3) 4.5 0.0045 P1 cortex TGCACACACA (29) 4.5 0.0045 Hypothalamus TGCTGCCAGA (4) 7.2 0.0072 Hypothalamus AAAAATTAAT (4) 1.8 0.0018 Hypothalamus AGCTTCCAGC (3) 1.8 0.0018 Hypothalamus ATCCGGCGCC (4) 1.8 0.0018 Hypothalamus TGCACACACA (29) 1.8 0.0018 E12.5 retina TGCACACACA (29) 5.6 0.0056 E12.5 retina TGCACACATA (16) 5.6 0.0056 E12.5 retina AGCTTCCAGC (3) 3.8 0.0038 E12.5 retina ATCCGGCGCC (4) 1.9 0.0019 E12.5 retina GGTCCAGGAC (5) 1.9 0.0019 E12.5 retina TGAGTGTGTG (7) 1.9 0.0019 E14.5 retina TGCACACACA (29) 9.1 0.0091 E14.5 retina ATCCGGCGCC (4) 3.6 0.0036 E14.5 retina GGTCCAGGAC (5) 1.8 0.0018 E14.5 retina TGAGTGTGTG (7) 1.8 0.0018 E14.5 retina TGCACACATA (16) 1.8 0.0018 E16.5 retina ATCCGGCGCC (4) 12.7 0.0127 E16.5 retina TGCACACACA (29) 9.1 0.0091 E16.5 retina AAAAATTAAT (4) 1.8 0.0018 E16.5 retina GGTCCAGGAC (5) 1.8 0.0018 E18.5 retina ATCCGGCGCC (4) 9.1 0.0091 E18.5 retina TGCACACACA (29) 7.3 0.0073 E18.5 retina AGCTTCCAGC (3) 1.8 0.0018 E18.5 retina AGGCCAAGGA (3) 1.8 0.0018 P0.5 retina ATCCGGCGCC (4) 21.6 0.0216 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AGGCCAAGGA (3) 2 0.002 P0.5 retina TGCACACACA (29) 2 0.002 P2.5 retina TGCACACACA (29) 3.5 0.0035 P2.5 retina TGCTGCCAGA (4) 3.5 0.0035 P2.5 retina ATCCGGCGCC (4) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina ATCCGGCGCC (4) 5.9 0.0059 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTGACTACGG (2) 2 0.002 P4.5 retina TGCACACACA (29) 2 0.002 P6.5 retina TGCACACACA (29) 11.7 0.0117 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AGCTTCCACC (2) 1.7 0.0017 P6.5 retina AGCTTCCAGC (3) 1.7 0.0017 P6.5 retina ATCCGGCGCC (4) 1.7 0.0017 P6.5 retina TGCACACATA (16) 1.7 0.0017 P10.5 crx- retina ATCCGGCGCC (4) 18.6 0.0186 P10.5 crx- retina TGCACACACA (29) 3.7 0.0037 P10.5 crx- retina AGCTTCCAGC (3) 1.9 0.0019 P10.5 crx- retina TGAGTGTGTG (7) 1.9 0.0019 P10.5 crx- retina TGCACACATA (16) 1.9 0.0019 P10.5 crx+ retina TGCACACACA (29) 9.6 0.0096 P10.5 crx+ retina ATCCGGCGCC (4) 7.7 0.0077 P10.5 crx+ retina TGAGTGTGTG (7) 1.9 0.0019 P10.5 crx+ retina TGCTGCCAGA (4) 1.9 0.0019 Adult retinal ATCCGGCGCC (4) 13 0.013 Adult retinal TGCACACACA (29) 9.3 0.0093 Adult retinal AGCTTCCAGC (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TGCACACATA (16) 1.9 0.0019 Adult retinal TGCTGCCAGA (4) 1.9 0.0019 ONL TGCACACACA (29) 15.3 0.0153 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AGCTTCCAGC (3) 1.9 0.0019