| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTGTCTCCTT (2) TTTTTTTATA (2)
| 3.2 | 0.0032 |
| P8 GC+1d culture | CTGTCTCCTT (2) GGTTTTAACT (4) TTTTTTTATA (2)
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | CTGTCTCCTT (2) GGTTTTAACT (4)
| 4.7 | 0.0047 |
| 3T3 fibroblasts | GCCACCAATG
| 3.5 | 0.0035 |
| P1 cortex | GCCACCAATG
| 4.5 | 0.0045 |
| Hypothalamus | GGTTTTAACT (4)
| 3.6 | 0.0036 |
| E12.5 retina | GGTTTTAACT (4) TTGCACAGAC TTTTTTTATA (2)
| 5.7 | 0.0057 |
| E14.5 retina | CTGTCTCCTT (2) GCCACCAATG GGTTTTAACT (4) TTGCACAGAC
| 16.3 | 0.0163 |
| E16.5 retina | GGTTTTAACT (4) TTTTTTTATA (2)
| 9 | 0.009 |
| P0.5 retina | CTGTCTCCTT (2)
| 2 | 0.002 |
| P2.5 retina | GGTTTTAACT (4) TTTTTTTATA (2)
| 3.6 | 0.0036 |
| P4.5 retina | CTGTCTCCTT (2) GGTTTTAACT (4) TGCTTGCTTT
| 8 | 0.008 |
| P6.5 retina | CTGTCTCCTT (2) GGTTTTAACT (4) TTTTTTTATA (2)
| 6.7 | 0.0067 |
| P10.5 crx+ retina | GGTTTTAACT (4) TGCTTGCTTT
| 3.8 | 0.0038 |
| Adult retinal | TGCTTGCTTT TTGCACAGAC
| 5.6 | 0.0056 |
| ONL | CTGTCTCCTT (2) GGTTTTAACT (4)
| 5.7 | 0.0057 |