Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196598	G430041M01Rik	RIKEN cDNA G430041M01 gene	6		101214
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | RNA binding
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGGAAGAG 58.7 0.0587 P8 Cb GC AAAGGGGAGG (6) 1.6 0.0016 P8 Cb GC CTTCCTAGTC 1.6 0.0016 P8 Cb GC TGGGAAGGAA (5) 1.6 0.0016 P8 Cb GC TGGGGAAAAG (5) 1.6 0.0016 Cb medulloblastoma TGGGGAAGAG 20.8 0.0208 Cb medulloblastoma AAAGGGGAGG (6) 4.6 0.0046 Cb medulloblastoma CTTCCTAGTC 4.6 0.0046 Cb medulloblastoma GAGCAGTTGA 2.3 0.0023 Cb medulloblastoma TGGGAAGGAA (5) 2.3 0.0023 Cb medulloblastoma TGGGGAAAAG (5) 2.3 0.0023 P8 GC+1d culture TGGGGAAGAG 27.4 0.0274 P8 GC+1d culture CTTCCTAGTC 3.4 0.0034 P8 GC+1d culture TGGGAAGGAA (5) 3.4 0.0034 P8 GC+1d culture AAAGGGGAGG (6) 2.3 0.0023 P8 GC+SHH+1d culture TGGGGAAGAG 48 0.048 P8 GC+SHH+1d culture CTTCCTAGTC 4.7 0.0047 P8 GC+SHH+1d culture TGGGAAGGAA (5) 2.3 0.0023 P8 GC+SHH+1d culture GTAACTTGAC (3) 1.2 0.0012 3T3 fibroblasts TGGGGAAGAG 7 0.007 3T3 fibroblasts GAGCAGTTGA 3.5 0.0035 E15 cortex TGGGGAAGAG 9.9 0.0099 E15 cortex AAAGGGGAGG (6) 4.9 0.0049 E15 cortex TGGGGAAAAG (5) 4.9 0.0049 P1 cortex TGGGGAAGAG 13.6 0.0136 P1 cortex AGTGATGTAG (3) 9.1 0.0091 Hypothalamus TGGGGAAGAG 29 0.029 Hypothalamus CTTCCTAGTC 1.8 0.0018 Hypothalamus TGGGAAGGAA (5) 1.8 0.0018 E12.5 retina TGGGGAAGAG 110.8 0.1108 E12.5 retina AAAGGGGAGG (6) 5.6 0.0056 E12.5 retina CTTCCTAGTC 1.9 0.0019 E12.5 retina GTAACTTGAC (3) 1.9 0.0019 E12.5 retina TGGGAAGGAA (5) 1.9 0.0019 E12.5 retina TGGGGAAAAG (5) 1.9 0.0019 E14.5 retina TGGGGAAGAG 45.5 0.0455 E14.5 retina CTTCCTAGTC 1.8 0.0018 E14.5 retina GAGCAGTTGA 1.8 0.0018 E16.5 retina TGGGGAAGAG 50.7 0.0507 E16.5 retina CTTCCTAGTC 3.6 0.0036 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina GTAACTTGAC (3) 1.8 0.0018 E18.5 retina TGGGGAAGAG 129.1 0.1291 P0.5 retina TGGGGAAGAG 23.6 0.0236 P0.5 retina AAAGGGGAGG (6) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina GTAACTTGAC (3) 2 0.002 P2.5 retina TGGGGAAGAG 49.3 0.0493 P2.5 retina AAAGGGGAGG (6) 7 0.007 P4.5 retina TGGGGAAGAG 107 0.107 P4.5 retina TGGGGAAAAG (5) 4 0.004 P4.5 retina AGTGATGTAG (3) 2 0.002 P4.5 retina GTAACTTGAC (3) 2 0.002 P4.5 retina TGGGAAGGAA (5) 2 0.002 P6.5 retina TGGGGAAGAG 65 0.065 P6.5 retina GTAACTTGAC (3) 3.3 0.0033 P6.5 retina AAAGGGGAGG (6) 1.7 0.0017 P10.5 crx- retina TGGGGAAGAG 33.4 0.0334 P10.5 crx- retina CTTCCTAGTC 1.9 0.0019 P10.5 crx+ retina TGGGGAAGAG 63.4 0.0634 P10.5 crx+ retina CTTCCTAGTC 1.9 0.0019 P10.5 crx+ retina GAGCAGTTGA 1.9 0.0019 P10.5 crx+ retina GTAACTTGAC (3) 1.9 0.0019 P10.5 crx+ retina TGGGGAAAAG (5) 1.9 0.0019 Adult retinal TGGGGAAGAG 25.9 0.0259 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal AAAGGGGAGG (6) 1.9 0.0019 Adult retinal AGTGATGTAG (3) 1.9 0.0019 ONL TGGGGAAGAG 44.1 0.0441 ONL AAAGGGGAGG (6) 3.8 0.0038 ONL TGGGAAGGAA (5) 1.9 0.0019