Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196605	Hk1	hexokinase 1	10	10 30.0 cM	15275
Gene Ontology	ATP binding | catalytic activity | cytosol | glycolysis | hexokinase activity | hexokinase activity | kinase activity | membrane | mitochondrion | transferase activity
Human Homolog	HK1[hexokinase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCGGGAAT (4) 316.5 0.3165 P8 Cb GC GAGTCTGAGG (4) 3.3 0.0033 P8 Cb GC GGGGAGGCGG (5) 1.6 0.0016 Cb medulloblastoma GCCCGGGAAT (4) 228.9 0.2289 Cb medulloblastoma GAGAAAAGGA (9) 9.2 0.0092 Cb medulloblastoma GAGTCTGAGG (4) 6.9 0.0069 Cb medulloblastoma GAGGAGATGA (3) 4.6 0.0046 Cb medulloblastoma CACCAAACAG 2.3 0.0023 Cb medulloblastoma GACTGGGGGC (3) 2.3 0.0023 P8 GC+1d culture GCCCGGGAAT (4) 238.6 0.2386 P8 GC+1d culture GCACTGCTGT (3) 6.8 0.0068 P8 GC+1d culture GAGAAAAGGA (9) 1.1 0.0011 P8 GC+1d culture GAGGAGATGA (3) 1.1 0.0011 P8 GC+1d culture TTCACACTCG 1.1 0.0011 P8 GC+SHH+1d culture GCCCGGGAAT (4) 347.8 0.3478 P8 GC+SHH+1d culture GAGAAAAGGA (9) 3.5 0.0035 P8 GC+SHH+1d culture GCACTGCTGT (3) 3.5 0.0035 P8 GC+SHH+1d culture GAGTCTGAGG (4) 2.3 0.0023 P8 GC+SHH+1d culture CACCAAACAG 1.2 0.0012 3T3 fibroblasts GCCCGGGAAT (4) 105.1 0.1051 3T3 fibroblasts GACTGGGGGC (3) 7 0.007 3T3 fibroblasts GCACTGCTGT (3) 3.5 0.0035 E15 cortex GCCCGGGAAT (4) 207.8 0.2078 E15 cortex GAGAAAAGGA (9) 14.8 0.0148 E15 cortex GACTGGGGGC (3) 4.9 0.0049 P1 cortex GCCCGGGAAT (4) 63.6 0.0636 P1 cortex GCACTGCTGT (3) 4.5 0.0045 Hypothalamus GCCCGGGAAT (4) 320.6 0.3206 Hypothalamus GAGAAAAGGA (9) 5.4 0.0054 Hypothalamus GCACTGCTGT (3) 3.6 0.0036 Hypothalamus GAGAAAGGAA (5) 1.8 0.0018 E12.5 retina GCCCGGGAAT (4) 499.4 0.4994 E12.5 retina GACTGGGGGC (3) 1.9 0.0019 E12.5 retina GAGAAAAGGA (9) 1.9 0.0019 E12.5 retina GGGGAGGCGG (5) 1.9 0.0019 E14.5 retina GCCCGGGAAT (4) 329.8 0.3298 E14.5 retina GACTGGGGGC (3) 3.6 0.0036 E14.5 retina GAGTCTGAGG (4) 3.6 0.0036 E14.5 retina GAGAAAGGAA (5) 1.8 0.0018 E16.5 retina GCCCGGGAAT (4) 273.5 0.2735 E16.5 retina GAGTCTGAGG (4) 3.6 0.0036 E16.5 retina GCACTGCTGT (3) 1.8 0.0018 E18.5 retina GCCCGGGAAT (4) 603.9 0.6039 E18.5 retina GCACTGCTGT (3) 3.6 0.0036 P0.5 retina GCCCGGGAAT (4) 319.9 0.3199 P0.5 retina GACTGGGGGC (3) 3.9 0.0039 P0.5 retina GCACTGCTGT (3) 2 0.002 P2.5 retina GCCCGGGAAT (4) 327.3 0.3273 P2.5 retina GAGAAAAGGA (9) 1.8 0.0018 P2.5 retina GCACTGCTGT (3) 1.8 0.0018 P4.5 retina GCCCGGGAAT (4) 352.7 0.3527 P4.5 retina GACTGGGGGC (3) 2 0.002 P6.5 retina GCCCGGGAAT (4) 225.1 0.2251 P6.5 retina GCACTGCTGT (3) 3.3 0.0033 P6.5 retina GACTGGGGGC (3) 1.7 0.0017 P6.5 retina GGGGAGGCGG (5) 1.7 0.0017 P6.5 retina TTCACACTCG 1.7 0.0017 P10.5 crx- retina GCCCGGGAAT (4) 50.2 0.0502 P10.5 crx- retina GCACTGCTGT (3) 3.7 0.0037 P10.5 crx- retina CACCAAACCA (3) 1.9 0.0019 P10.5 crx- retina GAGAAAAGGA (9) 1.9 0.0019 P10.5 crx+ retina GCCCGGGAAT (4) 246.1 0.2461 P10.5 crx+ retina GCACTGCTGT (3) 5.8 0.0058 P10.5 crx+ retina CACCAAACCA (3) 1.9 0.0019 P10.5 crx+ retina GAGTCTGAGG (4) 1.9 0.0019 Adult retinal GCCCGGGAAT (4) 70.4 0.0704 Adult retinal GCACTGCTGT (3) 25.9 0.0259 Adult retinal CACCAAACCA (3) 3.7 0.0037 Adult retinal CACCAAACAG 1.9 0.0019 Adult retinal GAGAAAAGGA (9) 1.9 0.0019 Adult retinal GAGGAGATGA (3) 1.9 0.0019 Adult retinal TTCACACTCG 1.9 0.0019 ONL GCCCGGGAAT (4) 86.2 0.0862 ONL GCACTGCTGT (3) 15.3 0.0153 ONL CACCAAACCA (3) 1.9 0.0019 ONL GAGAAAGGAA (5) 1.9 0.0019