Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196607	Eif5a	eukaryotic translation initiation factor 5A	19	19 15.0 cM	276770
Gene Ontology	apoptosis | cytoplasm | nucleus
Human Homolog	EIF5A[eukaryotic translation initiation factor 5A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 159 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAGTGGGGA (3) 21.2 0.0212 P8 Cb GC CAGAGGTCCA (3) 13.1 0.0131 P8 Cb GC AGCCTACAGA (5) 3.3 0.0033 P8 Cb GC GCCTTGGTGA (2) 3.3 0.0033 P8 Cb GC AATCCTGGAG (2) 1.6 0.0016 P8 Cb GC CCAAGGGTCC (4) 1.6 0.0016 P8 Cb GC GCCTTTGGTG (9) 1.6 0.0016 P8 Cb GC GGCTTTGGTG (9) 1.6 0.0016 P8 Cb GC TAAATCAACT (4) 1.6 0.0016 Cb medulloblastoma CAGAGGTCCA (3) 32.4 0.0324 Cb medulloblastoma ACAGTGGGGA (3) 25.4 0.0254 Cb medulloblastoma GCCTTGGTGA (2) 13.9 0.0139 Cb medulloblastoma AGCCTACAGA (5) 6.9 0.0069 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma CCAAGGCTCC (2) 4.6 0.0046 Cb medulloblastoma CCAAGGGTCC (4) 2.3 0.0023 Cb medulloblastoma GCTCCCTCAT (2) 2.3 0.0023 Cb medulloblastoma GGCTTTGGTG (9) 2.3 0.0023 P8 GC+1d culture CAGAGGTCCA (3) 30.8 0.0308 P8 GC+1d culture ACAGTGGGGA (3) 21.7 0.0217 P8 GC+1d culture GCCTTGGTGA (2) 17.1 0.0171 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture AGCCTAACAG 1.1 0.0011 P8 GC+1d culture CCAAGGGTCC (4) 1.1 0.0011 P8 GC+1d culture GCCGGCCTTT 1.1 0.0011 P8 GC+1d culture GCCTGGTGAA (3) 1.1 0.0011 P8 GC+1d culture GGCCTTGGGG (6) 1.1 0.0011 P8 GC+SHH+1d culture ACAGTGGGGA (3) 26.9 0.0269 P8 GC+SHH+1d culture CAGAGGTCCA (3) 22.2 0.0222 P8 GC+SHH+1d culture GCCTTGGTGA (2) 22.2 0.0222 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture CCAAGGGTCC (4) 3.5 0.0035 P8 GC+SHH+1d culture GGCTTTGGTG (9) 3.5 0.0035 P8 GC+SHH+1d culture AGCCTAACAG 1.2 0.0012 P8 GC+SHH+1d culture AGCCTACAGA (5) 1.2 0.0012 P8 GC+SHH+1d culture GCCGGCCTTT 1.2 0.0012 P8 GC+SHH+1d culture GCCTGGTGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GCTCCCTCAT (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCCTTGGGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TAAATCAACT (4) 1.2 0.0012 3T3 fibroblasts GCCTTGGTGA (2) 94.6 0.0946 3T3 fibroblasts ACAGTGGGGA (3) 14 0.014 3T3 fibroblasts GGCTTTGGTG (9) 14 0.014 3T3 fibroblasts CCAAGGGTCC (4) 7 0.007 3T3 fibroblasts GCCGGCCTTT 7 0.007 3T3 fibroblasts GCCTGGTGAA (3) 3.5 0.0035 3T3 fibroblasts GCTCCCTCAT (2) 3.5 0.0035 3T3 fibroblasts GGCCTTGGGG (6) 3.5 0.0035 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 E15 cortex GCCTTGGTGA (2) 19.8 0.0198 E15 cortex ACAGTGGGGA (3) 14.8 0.0148 E15 cortex CATCTGGGGA (6) 14.8 0.0148 E15 cortex GGCCTTGGGG (6) 14.8 0.0148 E15 cortex AGCCTACAGA (5) 4.9 0.0049 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 P1 cortex TAAATCAACT (4) 13.6 0.0136 P1 cortex CCAAGGGTCC (4) 9.1 0.0091 P1 cortex GCCTTGGTGA (2) 9.1 0.0091 P1 cortex GCTCCCTCAT (2) 9.1 0.0091 P1 cortex AGCCTAACAG 4.5 0.0045 P1 cortex GCAGACAGCA (3) 4.5 0.0045 P1 cortex GCCGGCCTTT 4.5 0.0045 Hypothalamus CCAAGGCTCC (2) 9.1 0.0091 Hypothalamus GGCTTTGGTG (9) 7.2 0.0072 Hypothalamus AGCCTACAGA (5) 5.4 0.0054 Hypothalamus GCCTTGGTGA (2) 5.4 0.0054 Hypothalamus ACAGTGGGGA (3) 1.8 0.0018 Hypothalamus GCTCCCTCAT (2) 1.8 0.0018 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 E12.5 retina ACAGTGGGGA (3) 35.7 0.0357 E12.5 retina GCCTTGGTGA (2) 31.9 0.0319 E12.5 retina AGCCTACAGA (5) 7.5 0.0075 E12.5 retina GGCTTTGGTG (9) 7.5 0.0075 E12.5 retina GCTCCCTCAT (2) 3.8 0.0038 E12.5 retina CCAAGGGTCC (4) 1.9 0.0019 E12.5 retina TAAATCAACT (4) 1.9 0.0019 E14.5 retina ACAGTGGGGA (3) 18.2 0.0182 E14.5 retina GGCTTTGGTG (9) 16.4 0.0164 E14.5 retina GGCCTTGGGG (6) 5.5 0.0055 E14.5 retina GCCGGCCTTT 1.8 0.0018 E14.5 retina GCCTTTGGTG (9) 1.8 0.0018 E16.5 retina ACAGTGGGGA (3) 18.1 0.0181 E16.5 retina GGCTTTGGTG (9) 18.1 0.0181 E16.5 retina GCCTTGGTGA (2) 12.7 0.0127 E16.5 retina AGCCTACAGA (5) 3.6 0.0036 E16.5 retina CAGAGGTCCA (3) 3.6 0.0036 E16.5 retina GGCCTTGGGG (6) 3.6 0.0036 E16.5 retina CCAAGGGTCC (4) 1.8 0.0018 E18.5 retina ACAGTGGGGA (3) 30.9 0.0309 E18.5 retina GCCTTGGTGA (2) 5.5 0.0055 E18.5 retina AATCCTGGAG (2) 1.8 0.0018 E18.5 retina GCCGGCCTTT 1.8 0.0018 E18.5 retina GCTCCCTCAT (2) 1.8 0.0018 E18.5 retina TAAATCAACT (4) 1.8 0.0018 P0.5 retina ACAGTGGGGA (3) 15.7 0.0157 P0.5 retina GCCTTGGTGA (2) 11.8 0.0118 P0.5 retina GGCTTTGGTG (9) 9.8 0.0098 P0.5 retina AGCCTACAGA (5) 3.9 0.0039 P0.5 retina GCCGGCCTTT 3.9 0.0039 P0.5 retina GGCCTTGGGG (6) 3.9 0.0039 P0.5 retina GGCCTTTGGC (4) 3.9 0.0039 P0.5 retina CCAAGGGTCC (4) 2 0.002 P0.5 retina GCCTTTGGTG (9) 2 0.002 P0.5 retina TAAATCAACT (4) 2 0.002 P2.5 retina ACAGTGGGGA (3) 33.4 0.0334 P2.5 retina GGCCTTGGGG (6) 7 0.007 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina GGCCTTTGGC (4) 5.3 0.0053 P2.5 retina CAGAGGTCCA (3) 3.5 0.0035 P2.5 retina GCCTTGGTGA (2) 3.5 0.0035 P2.5 retina CCAAGGGTCC (4) 1.8 0.0018 P2.5 retina GCCTTTGGTG (9) 1.8 0.0018 P2.5 retina TAAATCAACT (4) 1.8 0.0018 P4.5 retina ACAGTGGGGA (3) 13.9 0.0139 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina GCCTTGGTGA (2) 7.9 0.0079 P4.5 retina AGCCTACAGA (5) 2 0.002 P4.5 retina CAGAGGTCCA (3) 2 0.002 P4.5 retina GCAGACAGCA (3) 2 0.002 P4.5 retina GGCCTTGGGG (6) 2 0.002 P4.5 retina GGCTTTGGTG (9) 2 0.002 P4.5 retina TAAATCAACT (4) 2 0.002 P6.5 retina ACAGTGGGGA (3) 16.7 0.0167 P6.5 retina GCCTTGGTGA (2) 5 0.005 P6.5 retina CAGAGGTCCA (3) 3.3 0.0033 P6.5 retina GCTCCCTCAT (2) 3.3 0.0033 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina GCCTTTGGTG (9) 1.7 0.0017 P6.5 retina GGCCTTGGGG (6) 1.7 0.0017 P6.5 retina GGCCTTTGGC (4) 1.7 0.0017 P10.5 crx- retina ACAGTGGGGA (3) 18.6 0.0186 P10.5 crx- retina GCCTTGGTGA (2) 16.7 0.0167 P10.5 crx- retina CCAAGGGTCC (4) 3.7 0.0037 P10.5 crx- retina GGCTTTGGTG (9) 3.7 0.0037 P10.5 crx- retina CAGAGGTCCA (3) 1.9 0.0019 P10.5 crx+ retina ACAGTGGGGA (3) 23.1 0.0231 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina GGCTTTGGTG (9) 5.8 0.0058 P10.5 crx+ retina AGCCTACAGA (5) 3.8 0.0038 P10.5 crx+ retina CCAAGGGTCC (4) 3.8 0.0038 P10.5 crx+ retina GCCTTGGTGA (2) 3.8 0.0038 P10.5 crx+ retina CAGAGGTCCA (3) 1.9 0.0019 P10.5 crx+ retina GCAGACAGCA (3) 1.9 0.0019 P10.5 crx+ retina GCCTGGTGAA (3) 1.9 0.0019 Adult retinal GCCTTGGTGA (2) 14.8 0.0148 Adult retinal ACAGTGGGGA (3) 9.3 0.0093 Adult retinal CCAAGGGTCC (4) 3.7 0.0037 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal AGCCTACAGA (5) 1.9 0.0019 Adult retinal CCAAGGCTCC (2) 1.9 0.0019 Adult retinal GCAGACAGCA (3) 1.9 0.0019 Adult retinal GCTCCCTCAT (2) 1.9 0.0019 ONL ACAGTGGGGA (3) 9.6 0.0096 ONL CCAAGGGTCC (4) 3.8 0.0038 ONL GCCTTGGTGA (2) 3.8 0.0038 ONL AATCCTGGAG (2) 1.9 0.0019 ONL AGCCTACAGA (5) 1.9 0.0019 ONL GCAGACAGCA (3) 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019