Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.197555	Ddx48	DEAD (Asp-Glu-Ala-Asp) box polypeptide 48	11		192170
Gene Ontology	ATP binding | ATP dependent helicase activity | DNA binding | helicase activity | hydrolase activity | nucleic acid binding | nucleus | protein biosynthesis | RNA binding | rRNA processing | translation initiation factor activity
Human Homolog	DDX48[DEAD (Asp-Glu-Ala-Asp) box polypeptide 48]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACATAATCC 13.1 0.0131 P8 Cb GC AATGTGGCTG (2) 3.3 0.0033 Cb medulloblastoma TACATAATCC 6.9 0.0069 Cb medulloblastoma AATGTGGCTG (2) 4.6 0.0046 P8 GC+1d culture TACATAATCC 21.7 0.0217 P8 GC+1d culture AATGTGGCTG (2) 1.1 0.0011 P8 GC+SHH+1d culture TACATAATCC 16.4 0.0164 P8 GC+SHH+1d culture AATGTGGCTG (2) 2.3 0.0023 P8 GC+SHH+1d culture GGCATCTCGT 1.2 0.0012 3T3 fibroblasts AATGTGGCTG (2) 7 0.007 3T3 fibroblasts TACATAATCC 3.5 0.0035 E15 cortex TACATAATCC 19.8 0.0198 E15 cortex AATGTGGCTG (2) 4.9 0.0049 P1 cortex AATGTGGCTG (2) 4.5 0.0045 Hypothalamus AATGTGGCTG (2) 12.7 0.0127 Hypothalamus TACATAATCC 1.8 0.0018 E12.5 retina TACATAATCC 16.9 0.0169 E12.5 retina AATGTGGCTG (2) 5.6 0.0056 E14.5 retina TACATAATCC 21.9 0.0219 E14.5 retina GGCATCTCGT 1.8 0.0018 E16.5 retina TACATAATCC 21.7 0.0217 E16.5 retina AATGTGGCTG (2) 5.4 0.0054 E18.5 retina TACATAATCC 34.6 0.0346 E18.5 retina GGCATCTCGT 1.8 0.0018 P0.5 retina TACATAATCC 15.7 0.0157 P0.5 retina AATGTGGCTG (2) 3.9 0.0039 P2.5 retina TACATAATCC 19.4 0.0194 P2.5 retina AATGTGGCTG (2) 3.5 0.0035 P4.5 retina TACATAATCC 23.8 0.0238 P6.5 retina TACATAATCC 15 0.015 P10.5 crx- retina TACATAATCC 20.4 0.0204 P10.5 crx- retina AATGTGGCTG (2) 1.9 0.0019 P10.5 crx+ retina TACATAATCC 13.5 0.0135 Adult retinal TACATAATCC 7.4 0.0074 Adult retinal GGCATCTCGT 3.7 0.0037 Adult retinal AATGTGGCTG (2) 1.9 0.0019 ONL TACATAATCC 3.8 0.0038