Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1977	D16Ium35e	DNA segment, Chr 16, Indiana University Medical 35, expressed	16	16 32.9 cM	28176
Mm.1977	End3	ES neuronal differentiation 3			353311
Mm.1977	Epha3	Eph receptor A3	16		13837
Gene Ontology	ATP binding | ephrin receptor activity | extracellular space | integral to membrane | kinase activity | membrane | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | transferase activity | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	EPHA3[EphA3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCCAAAAAA (9) 6.5 0.0065 P8 Cb GC ATTTAATAAA (11) 1.6 0.0016 Cb medulloblastoma AGCCAAAAAA (9) 32.4 0.0324 Cb medulloblastoma ATTTAATAAA (11) 4.6 0.0046 P8 GC+1d culture GGGCCTGCTC (5) 10.3 0.0103 P8 GC+1d culture AGCCAAAAAA (9) 6.8 0.0068 P8 GC+1d culture ATTTAATAAA (11) 2.3 0.0023 P8 GC+1d culture GAGAATGGCT (9) 1.1 0.0011 P8 GC+1d culture GTTCATTTAG (3) 1.1 0.0011 P8 GC+SHH+1d culture AGCCAAAAAA (9) 18.7 0.0187 P8 GC+SHH+1d culture GGGCCTGCTC (5) 10.5 0.0105 3T3 fibroblasts GGGCCTGCTC (5) 3.5 0.0035 E15 cortex AGCCAAAAAA (9) 4.9 0.0049 E15 cortex GTTCATTTAG (3) 4.9 0.0049 P1 cortex ATTTAATAAA (11) 4.5 0.0045 P1 cortex GGGCCTGCTC (5) 4.5 0.0045 Hypothalamus ATTTAATAAA (11) 1.8 0.0018 Hypothalamus GAGAATGGCT (9) 1.8 0.0018 Hypothalamus GGGCCTGCTC (5) 1.8 0.0018 E12.5 retina GGGCCTGCTC (5) 5.6 0.0056 E12.5 retina AGCCAAAAAA (9) 3.8 0.0038 E14.5 retina AGCCAAAAAA (9) 5.5 0.0055 E14.5 retina ATTTAATAAA (11) 1.8 0.0018 E14.5 retina GGGCCTGCTC (5) 1.8 0.0018 E16.5 retina AGCCAAAAAA (9) 3.6 0.0036 E16.5 retina ATTTAATAAA (11) 1.8 0.0018 E16.5 retina GGGCCTGCTC (5) 1.8 0.0018 E18.5 retina AGCCAAAAAA (9) 14.6 0.0146 E18.5 retina GGGCCTGCTC (5) 3.6 0.0036 E18.5 retina GTTCATTTAG (3) 1.8 0.0018 E18.5 retina TACCAACAAA (6) 1.8 0.0018 P0.5 retina GGGCCTGCTC (5) 11.8 0.0118 P0.5 retina GTTCATTTAG (3) 5.9 0.0059 P0.5 retina AGCCAAAAAA (9) 3.9 0.0039 P2.5 retina GGGCCTGCTC (5) 8.8 0.0088 P2.5 retina ATTTAATAAA (11) 7 0.007 P2.5 retina AGCCAAAAAA (9) 1.8 0.0018 P2.5 retina GTTCATTTAG (3) 1.8 0.0018 P2.5 retina TACCAACAAA (6) 1.8 0.0018 P4.5 retina GGGCCTGCTC (5) 11.9 0.0119 P4.5 retina ATTTAATAAA (11) 5.9 0.0059 P4.5 retina TACCAACAAA (6) 2 0.002 P6.5 retina GGGCCTGCTC (5) 11.7 0.0117 P6.5 retina AGCCAAAAAA (9) 10 0.01 P6.5 retina ATTTAATAAA (11) 1.7 0.0017 P6.5 retina GAGAATGGCT (9) 1.7 0.0017 P6.5 retina GTTCATTTAG (3) 1.7 0.0017 P10.5 crx- retina AGCCAAAAAA (9) 3.7 0.0037 P10.5 crx- retina GGGCCTGCTC (5) 3.7 0.0037 P10.5 crx- retina GTTCATTTAG (3) 3.7 0.0037 P10.5 crx- retina ATTTAATAAA (11) 1.9 0.0019 P10.5 crx+ retina GGGCCTGCTC (5) 25 0.025 P10.5 crx+ retina AGCCAAAAAA (9) 3.8 0.0038 P10.5 crx+ retina ATTTAATAAA (11) 1.9 0.0019 P10.5 crx+ retina GTTCATTTAG (3) 1.9 0.0019 Adult retinal GGGCCTGCTC (5) 75.9 0.0759 Adult retinal AGCCAAAAAA (9) 5.6 0.0056 ONL GGGCCTGCTC (5) 49.8 0.0498 ONL ATTTAATAAA (11) 7.7 0.0077 ONL AGCCAAAAAA (9) 1.9 0.0019