Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19806	Hdac2	histone deacetylase 2	10	10 B1 (10 26.0 cM)	15182
Gene Ontology	chromatin modification | heterochromatin | histone deacetylase activity | hydrolase activity | nucleus | protein binding | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	HDAC2[histone deacetylase 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 12 In Situ Hybridization Images

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SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAATA (3) AAGACAGTGG (2) AAGCCTCATA CCAAAACAGT CTTTATGTGA GACTGTATTT (2) GTGATGGTGT 37.5 0.0375 Cb medulloblastoma AAAAAAAATA (3) AAGACAGTGG (2) 6.9 0.0069 P8 GC+1d culture AAAAAAAATA (3) AAGAAAACAG (3) AAGACAGTGG (2) CTTTATGTGA GACTGTATTT (2) 19.4 0.0194 P8 GC+SHH+1d culture AAGACAGTGG (2) CCAAAACAGT CTTTATGTGA GACTGTATTT (2) 11.7 0.0117 E15 cortex CTTTATGTGA 4.9 0.0049 P1 cortex CTTTATGTGA GACTGTATTT (2) 18.1 0.0181 Hypothalamus TTTAAAAACA 1.8 0.0018 E12.5 retina AAGACAGTGG (2) CTTTATGTGA GACTGTATTT (2) 13.1 0.0131 E14.5 retina AAGCCTCATA CCAAAACAGT CTTTATGTGA 7.2 0.0072 E16.5 retina AAAAAAAATA (3) AAGACAGTGG (2) CTTTATGTGA GACTGTATTT (2) GTGATGGTGT 18 0.018 E18.5 retina AAAAAAAATA (3) AAGACAGTGG (2) CTTTATGTGA 18.1 0.0181 P0.5 retina AAGCCTCATA CTTTATGTGA TTTAAAAACA 11.9 0.0119 P2.5 retina CTTTATGTGA GACTGTATTT (2) 15.9 0.0159 P4.5 retina AAAAAAAATA (3) AAGACAGTGG (2) CTTTATGTGA 15.8 0.0158 P6.5 retina AAGAAAACAG (3) CTTTATGTGA 3.4 0.0034 P10.5 crx- retina CTTTATGTGA GACTGTATTT (2) 11.2 0.0112 P10.5 crx+ retina CTTTATGTGA 5.8 0.0058 Adult retinal AAGAAAACAG (3) CTTTATGTGA GACTGTATTT (2) 7.5 0.0075 ONL AAAAAAAATA (3) AAGACAGTGG (2) CTTTATGTGA GACTGTATTT (2) TTTAAAAACA 13.3 0.0133