Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19937	Ggcx	gamma-glutamyl carboxylase	6		56316
Gene Ontology	gamma-glutamyl carboxylase activity | integral to membrane | ligase activity | nucleic acid binding | peptidyl-glutamic acid carboxylation | protein binding
Human Homolog	GGCX[gamma-glutamyl carboxylase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 121 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC ACTGCTTGCC (5) 11.4 0.0114 P8 Cb GC TAGACCAGAC (2) 4.9 0.0049 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma ACTGCTTGCC (5) 6.9 0.0069 Cb medulloblastoma GTTGGTCCCT 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture ACTGCTTGCC (5) 10.3 0.0103 P8 GC+1d culture AAACGAAAGT (3) 3.4 0.0034 P8 GC+1d culture GTGTTGAAGA (8) 3.4 0.0034 P8 GC+1d culture TAGACCAGAC (2) 3.4 0.0034 P8 GC+1d culture GCCAGCTGCA (2) 2.3 0.0023 P8 GC+1d culture CTGACTGGGT (4) 1.1 0.0011 P8 GC+1d culture GCCAGGTGGA (2) 1.1 0.0011 P8 GC+1d culture GTTTCAGCAC (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture ACTGCTTGCC (5) 5.9 0.0059 P8 GC+SHH+1d culture GTGTTGAAGA (8) 4.7 0.0047 P8 GC+SHH+1d culture AAACGAAAGT (3) 2.3 0.0023 P8 GC+SHH+1d culture TAGACCAGAC (2) 2.3 0.0023 P8 GC+SHH+1d culture CTGACTGGGT (4) 1.2 0.0012 P8 GC+SHH+1d culture GCCAGCTGCA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTTGGTCCCT 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts ACTGCTTGCC (5) 17.5 0.0175 3T3 fibroblasts GCCAGGTGGA (2) 3.5 0.0035 3T3 fibroblasts GCCGGCTGCA (3) 3.5 0.0035 3T3 fibroblasts GGCAGGTGCA (2) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex AAACGAAAGT (3) 24.7 0.0247 E15 cortex ACTGCTTGCC (5) 9.9 0.0099 E15 cortex TAGACCAGAC (2) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex AAACGAAAGT (3) 13.6 0.0136 P1 cortex ACTGCTTGCC (5) 9.1 0.0091 P1 cortex GAGAAATCTT (3) 4.5 0.0045 P1 cortex GTGTTGAAGA (8) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus ACTGCTTGCC (5) 7.2 0.0072 Hypothalamus GGCAGGTGCA (2) 5.4 0.0054 Hypothalamus AAACGAAAGT (3) 3.6 0.0036 Hypothalamus GCCAGCTGCA (2) 3.6 0.0036 Hypothalamus TAGACCAGAC (2) 3.6 0.0036 Hypothalamus GTTTCAGCAC (3) 1.8 0.0018 Hypothalamus TGAACAAGCT (3) 1.8 0.0018 Hypothalamus TTTCCAGCAT 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina ACTGCTTGCC (5) 13.1 0.0131 E12.5 retina GTGTTGAAGA (8) 3.8 0.0038 E12.5 retina AAACGAAAGT (3) 1.9 0.0019 E12.5 retina GGCAGGTGCA (2) 1.9 0.0019 E12.5 retina GTTTCAGCAC (3) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina ACTGCTTGCC (5) 12.8 0.0128 E14.5 retina AAACGAAAGT (3) 3.6 0.0036 E14.5 retina GCCAGCTGCA (2) 3.6 0.0036 E14.5 retina CTGACTGGGT (4) 1.8 0.0018 E14.5 retina TTAAAGGAAT (3) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina ACTGCTTGCC (5) 16.3 0.0163 E16.5 retina AAACGAAAGT (3) 1.8 0.0018 E16.5 retina GAGAAATCTT (3) 1.8 0.0018 E16.5 retina GCCAGCTGCA (2) 1.8 0.0018 E16.5 retina GTGTTGAAGA (8) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina ACTGCTTGCC (5) 3.6 0.0036 E18.5 retina GGCAGGTGCA (2) 1.8 0.0018 E18.5 retina GTGTTGAAGA (8) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina ACTGCTTGCC (5) 29.4 0.0294 P0.5 retina GTGTTGAAGA (8) 7.9 0.0079 P0.5 retina AAACGAAAGT (3) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina ACTGCTTGCC (5) 14.1 0.0141 P2.5 retina AAACGAAAGT (3) 3.5 0.0035 P2.5 retina TAGACCAGAC (2) 3.5 0.0035 P2.5 retina GTGTTGAAGA (8) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina ACTGCTTGCC (5) 15.9 0.0159 P4.5 retina AAACGAAAGT (3) 4 0.004 P4.5 retina GCCAGCTGCA (2) 2 0.002 P4.5 retina GTGTTGAAGA (8) 2 0.002 P4.5 retina GTTGGTCCCT 2 0.002 P4.5 retina TAGACCAGAC (2) 2 0.002 P4.5 retina TTAAAGGAAT (3) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina ACTGCTTGCC (5) 26.7 0.0267 P6.5 retina AAACGAAAGT (3) 8.3 0.0083 P6.5 retina GTGTTGAAGA (8) 8.3 0.0083 P6.5 retina TAGACCAGAC (2) 5 0.005 P6.5 retina GAGAAATCTT (3) 3.3 0.0033 P6.5 retina GGCAGGTGCA (2) 3.3 0.0033 P6.5 retina GCCGGCTGCA (3) 1.7 0.0017 P6.5 retina TGAACAAGCT (3) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina ACTGCTTGCC (5) 55.7 0.0557 P10.5 crx- retina GTGTTGAAGA (8) 3.7 0.0037 P10.5 crx- retina GCCAGGTGGA (2) 1.9 0.0019 P10.5 crx- retina GGCAGGTGCA (2) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina ACTGCTTGCC (5) 17.3 0.0173 P10.5 crx+ retina GTGTTGAAGA (8) 5.8 0.0058 P10.5 crx+ retina AAACGAAAGT (3) 3.8 0.0038 P10.5 crx+ retina GCCAGCTGCA (2) 3.8 0.0038 P10.5 crx+ retina GGCAGGTGCA (2) 3.8 0.0038 P10.5 crx+ retina GTTTCAGCAC (3) 3.8 0.0038 P10.5 crx+ retina TGAACAAGCT (3) 1.9 0.0019 P10.5 crx+ retina TTAAAGGAAT (3) 1.9 0.0019 P10.5 crx+ retina TTTCCAGCAT 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal ACTGCTTGCC (5) 38.9 0.0389 Adult retinal GTGTTGAAGA (8) 5.6 0.0056 Adult retinal GTTTCAGCAC (3) 3.7 0.0037 Adult retinal AAACGAAAGT (3) 1.9 0.0019 Adult retinal CTGACTGGGT (4) 1.9 0.0019 Adult retinal GCCGGCTGCA (3) 1.9 0.0019 Adult retinal TGAACAAGCT (3) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GTGTTGAAGA (8) 15.3 0.0153 ONL ACTGCTTGCC (5) 7.7 0.0077 ONL GTTTCAGCAC (3) 1.9 0.0019