Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.200120
D1Mgi51
DNA Segment, Chr 1, Mouse Genome Informatics 51
1
98671
Mm.200120
Sertad3
SERTA domain containing 3
7
170742
Human Homolog
SERTAD3[SERTA domain containing 3]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGCAATAGGG
(
2
)
11.4
0.0114
P8 Cb GC
GGAGGCTTAA
(
3
)
3.3
0.0033
Cb medulloblastoma
TGCAATAGGG
(
2
)
13.9
0.0139
Cb medulloblastoma
GGAGGCTTAA
(
3
)
2.3
0.0023
P8 GC+1d culture
CTGTGCTACT
(
3
)
3.4
0.0034
P8 GC+1d culture
GGAGGCTTAA
(
3
)
2.3
0.0023
P8 GC+1d culture
TGCAATAGGG
(
2
)
1.1
0.0011
P8 GC+1d culture
TGTGCGTGTC
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGCAATAGGG
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
CTGTGCTACT
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTGCGTGTC
(
3
)
1.2
0.0012
3T3 fibroblasts
TGCAATAGGG
(
2
)
14
0.014
3T3 fibroblasts
TGTGCGTGTC
(
3
)
3.5
0.0035
E15 cortex
TGCAATAGGG
(
2
)
4.9
0.0049
E15 cortex
TGTGCGTGTC
(
3
)
4.9
0.0049
P1 cortex
GGAGGCTTAA
(
3
)
9.1
0.0091
Hypothalamus
TGCAATAGGG
(
2
)
7.2
0.0072
E12.5 retina
TGCAATAGGG
(
2
)
7.5
0.0075
E14.5 retina
TGCAATAGGG
(
2
)
7.3
0.0073
E16.5 retina
TGCAATAGGG
(
2
)
10.9
0.0109
E16.5 retina
TGTGCGTGTC
(
3
)
1.8
0.0018
E18.5 retina
TGCAATAGGG
(
2
)
18.2
0.0182
E18.5 retina
TGTGCGTGTC
(
3
)
1.8
0.0018
P0.5 retina
TGCAATAGGG
(
2
)
19.6
0.0196
P2.5 retina
TGCAATAGGG
(
2
)
12.3
0.0123
P2.5 retina
CTGTGCTACT
(
3
)
3.5
0.0035
P2.5 retina
GGAGGCTTAA
(
3
)
1.8
0.0018
P4.5 retina
TGCAATAGGG
(
2
)
19.8
0.0198
P4.5 retina
GGAGGCTTAA
(
3
)
2
0.002
P4.5 retina
TGTGCGTGTC
(
3
)
2
0.002
P6.5 retina
TGCAATAGGG
(
2
)
13.3
0.0133
P6.5 retina
CTGTGCTACT
(
3
)
3.3
0.0033
P10.5 crx- retina
TGCAATAGGG
(
2
)
18.6
0.0186
P10.5 crx- retina
TGTGCGTGTC
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGCAATAGGG
(
2
)
9.6
0.0096
P10.5 crx+ retina
TGTGCGTGTC
(
3
)
1.9
0.0019
Adult retinal
TGCAATAGGG
(
2
)
9.3
0.0093
ONL
TGCAATAGGG
(
2
)
3.8
0.0038
ONL
TGTGCGTGTC
(
3
)
1.9
0.0019
