Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.201322	D2Ertd63e	DNA segment, Chr 2, ERATO Doi 63, expressed	2	2 101.0 cM	51845
Mm.201322	Dpm1	dolichol-phosphate (beta-D) mannosyltransferase 1	2		13480
Mm.201322	Adnp	activity-dependent neuroprotective protein	2		11538
Gene Ontology	DNA binding | neuropeptide hormone activity | neuropeptide signaling pathway | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | zinc ion binding
Human Homolog	ADNP[activity-dependent neuroprotector]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGCACACA (5) CAAGAATTGA (3) GTCTGTCTTG (3) TGAAATGAAA (5) 8.1 0.0081 Cb medulloblastoma GTCTGTCTTG (3) TATCTTCTGA (3) TGAAATGAAA (5) 9.2 0.0092 P8 GC+1d culture AATGCACACA (5) CAAGAATTGA (3) TATCTTCTGA (3) TTATTTTAGC (3) 7.9 0.0079 P8 GC+SHH+1d culture AATGCACACA (5) CAAGAATTGA (3) CTCCAAACTC (3) TGAAATGAAA (5) TTATTTTAGC (3) 14.1 0.0141 E15 cortex CTCCAAACTC (3) 9.9 0.0099 P1 cortex CAAGAATTGA (3) 9.1 0.0091 Hypothalamus CAAGAATTGA (3) TGAAATGAAA (5) 3.6 0.0036 E12.5 retina CAAGAATTGA (3) 7.5 0.0075 E14.5 retina TGAAATGAAA (5) 1.8 0.0018 E16.5 retina CAAGAATTGA (3) GTCTGTCTTG (3) TGAAATGAAA (5) 10.8 0.0108 E18.5 retina AATGCACACA (5) TGAAATGAAA (5) TTATTTTAGC (3) 7.2 0.0072 P0.5 retina AATGCACACA (5) CAAGAATTGA (3) TGAAATGAAA (5) 7.9 0.0079 P2.5 retina CAAGAATTGA (3) TGAAATGAAA (5) TTATTTTAGC (3) 14 0.014 P4.5 retina CAAGAATTGA (3) TGAAATGAAA (5) TTATTTTAGC (3) 8 0.008 P6.5 retina AATGCACACA (5) CAAGAATTGA (3) TATCTTCTGA (3) TGAAATGAAA (5) 13.4 0.0134 P10.5 crx- retina CAAGAATTGA (3) TGAAATGAAA (5) 3.8 0.0038 P10.5 crx+ retina AATGCACACA (5) CAAGAATTGA (3) TGAAATGAAA (5) 5.7 0.0057 Adult retinal CAAGAATTGA (3) TGAAATGAAA (5) 9.3 0.0093 ONL AATGCACACA (5) CAAGAATTGA (3) 13.4 0.0134