Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2018	AI225912	expressed sequence AI225912	8		102015
Mm.2018	Cbfb	core binding factor beta	8	8 51.0 cM	12400
Gene Ontology	lymphocyte differentiation | myeloid blood cell differentiation | nucleus | ossification | positive regulation of transcription from Pol II promoter | protein binding | transcription coactivator activity
Human Homolog	CBFB[core-binding factor, beta subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACAGTAATA (4) 8.2 0.0082 P8 Cb GC AGTTTGGGTA (2) 1.6 0.0016 P8 Cb GC GTGTTAATGT (2) 1.6 0.0016 P8 Cb GC TCATTTAGAA (4) 1.6 0.0016 Cb medulloblastoma GACAGTAATA (4) 6.9 0.0069 P8 GC+1d culture GACAGTAATA (4) 2.3 0.0023 P8 GC+1d culture GTGTTAATGT (2) 2.3 0.0023 P8 GC+1d culture TGATCTTACT (3) 2.3 0.0023 P8 GC+SHH+1d culture GACAGTAATA (4) 9.4 0.0094 P8 GC+SHH+1d culture GAGGCCAGAA (2) 2.3 0.0023 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GACAGTAATA (4) 13.6 0.0136 Hypothalamus GACAGTAATA (4) 5.4 0.0054 E12.5 retina GACAGTAATA (4) 9.4 0.0094 E12.5 retina GAGGCCAGAA (2) 5.6 0.0056 E12.5 retina TGATCTTACT (3) 3.8 0.0038 E12.5 retina AGTTTGGGTA (2) 1.9 0.0019 E14.5 retina GACAGTAATA (4) 5.5 0.0055 E14.5 retina GAGGCCAGAA (2) 3.6 0.0036 E16.5 retina GACAGTAATA (4) 7.2 0.0072 E16.5 retina GAGGCCAGAA (2) 3.6 0.0036 E18.5 retina GACAGTAATA (4) 18.2 0.0182 E18.5 retina AGTTTGGGTA (2) 1.8 0.0018 E18.5 retina GTGTTAATGT (2) 1.8 0.0018 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina GACAGTAATA (4) 17.6 0.0176 P2.5 retina GAGGCCAGAA (2) 5.3 0.0053 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina GACAGTAATA (4) 17.8 0.0178 P4.5 retina GAGGCCAGAA (2) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina GACAGTAATA (4) 23.3 0.0233 P6.5 retina GAGGCCAGAA (2) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TGATCTTACT (3) 3.3 0.0033 P10.5 crx- retina GACAGTAATA (4) 11.1 0.0111 P10.5 crx- retina GAGGCCAGAA (2) 3.7 0.0037 P10.5 crx- retina TCATTTAGAA (4) 1.9 0.0019 P10.5 crx+ retina GACAGTAATA (4) 7.7 0.0077 P10.5 crx+ retina TCATTTAGAA (4) 3.8 0.0038 Adult retinal GACAGTAATA (4) 14.8 0.0148 Adult retinal GAGGCCAGAA (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GACAGTAATA (4) 3.8 0.0038 ONL AGTTTGGGTA (2) 1.9 0.0019 ONL GAGGCCAGAA (2) 1.9 0.0019