Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.202322	2900057D21Rik	RIKEN cDNA 2900057D21 gene	14		72993
Gene Ontology	cellular_component unknown | intracellular signaling cascade | molecular_function unknown
Human Homolog	APPL[adaptor protein containing pH domain, PTB domain and leucine zipper motif 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTTTAAAA (4) GTGTGGCTTG (2) TAAAGGGAGT (2) 8.1 0.0081 Cb medulloblastoma ATGCCGCAAT ATTTTTAAAA (4) ATTTTTATAC GTTTTGTGCA 20.8 0.0208 P8 GC+1d culture ATTTTTAAAA (4) GAAGAGATAA (2) GTGTGGCTTG (2) TAAAGGGAGT (2) 18.1 0.0181 P8 GC+SHH+1d culture ATTTTTAAAA (4) ATTTTTATAC GAAGAGATAA (2) GTTTTGTGCA TAAAGGGAGT (2) 11.8 0.0118 E15 cortex ATGCCGCAAT GTTTTGTGCA 9.8 0.0098 P1 cortex ATTTTTAAAA (4) ATTTTTATAC 18.1 0.0181 Hypothalamus ATTTTTAAAA (4) TAAAGGGAGT (2) 18.1 0.0181 E12.5 retina ATGCCGCAAT ATTTTTAAAA (4) GAAGAGATAA (2) 13.2 0.0132 E14.5 retina ATTTTTAAAA (4) ATTTTTATAC GTGTGGCTTG (2) TAAAGGGAGT (2) 10.8 0.0108 E16.5 retina TAAAGGGAGT (2) 1.8 0.0018 E18.5 retina ATGCCGCAAT ATTTTTAAAA (4) 9.1 0.0091 P0.5 retina ATTTTTAAAA (4) ATTTTTATAC GAAGAGATAA (2) GTGTGGCTTG (2) 13.8 0.0138 P2.5 retina ATTTTTAAAA (4) ATTTTTATAC GTGTGGCTTG (2) TAAAGGGAGT (2) 10.6 0.0106 P4.5 retina ATTTTTAAAA (4) ATTTTTATAC GAAGAGATAA (2) GTTTTGTGCA 10 0.01 P6.5 retina ATTTTTAAAA (4) GAAGAGATAA (2) TAAAGGGAGT (2) 15 0.015 P10.5 crx- retina ATTTTTAAAA (4) GAAGAGATAA (2) GTGTGGCTTG (2) 11.2 0.0112 P10.5 crx+ retina ATTTTTAAAA (4) ATTTTTATAC GAAGAGATAA (2) GTGTGGCTTG (2) TAAAGGGAGT (2) 11.4 0.0114 Adult retinal ATTTTTAAAA (4) ATTTTTATAC TAAAGGGAGT (2) 14.9 0.0149 ONL ATTTTTAAAA (4) ATTTTTATAC GAAGAGATAA (2) TAAAGGGAGT (2) 19.1 0.0191