Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.202358	Kpna6	karyopherin (importin) alpha 6	4		16650
Gene Ontology	intracellular protein transport | protein transport | protein transporter activity | protein-nucleus import | transport
Human Homolog	KPNA6[karyopherin alpha 6 (importin alpha 7)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAATAAA (17) 11.4 0.0114 P8 Cb GC TTTTTTTTCC (11) 11.4 0.0114 P8 Cb GC GCGTTGCGTG 6.5 0.0065 P8 Cb GC AGACACAAAT (3) 1.6 0.0016 Cb medulloblastoma GCGTTGCGTG 9.2 0.0092 Cb medulloblastoma AAAAAAAAGA (7) 6.9 0.0069 Cb medulloblastoma AAAAAATAAA (17) 6.9 0.0069 Cb medulloblastoma AGACACAAAT (3) 4.6 0.0046 Cb medulloblastoma TTTTTTTTCC (11) 4.6 0.0046 Cb medulloblastoma AATCCCTGCC (2) 2.3 0.0023 Cb medulloblastoma GATCCTTACA (2) 2.3 0.0023 Cb medulloblastoma GGAAGCCCAG (3) 2.3 0.0023 P8 GC+1d culture AAAAAATAAA (17) 8 0.008 P8 GC+1d culture GCGTTGCGTG 3.4 0.0034 P8 GC+1d culture AAAAAAAAGA (7) 2.3 0.0023 P8 GC+1d culture TTTTTTTTCC (11) 2.3 0.0023 P8 GC+1d culture AGACACAAAT (3) 1.1 0.0011 P8 GC+SHH+1d culture AGACACAAAT (3) 5.9 0.0059 P8 GC+SHH+1d culture TTTTTTTTCC (11) 5.9 0.0059 P8 GC+SHH+1d culture AAAAAATAAA (17) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAGA (7) 1.2 0.0012 P8 GC+SHH+1d culture GCGTTGCGTG 1.2 0.0012 P8 GC+SHH+1d culture GTCTCCATCG (2) 1.2 0.0012 3T3 fibroblasts GCGTTGCGTG 7 0.007 3T3 fibroblasts AGACACAAAT (3) 3.5 0.0035 3T3 fibroblasts GAGGGCTTCC (10) 3.5 0.0035 3T3 fibroblasts TTTTTTTTCC (11) 3.5 0.0035 E15 cortex GCGTTGCGTG 4.9 0.0049 P1 cortex GTCTCCATCG (2) 4.5 0.0045 Hypothalamus TTTTTTTTCC (11) 12.7 0.0127 Hypothalamus AAAAAATAAA (17) 9.1 0.0091 Hypothalamus AGACACAAAT (3) 3.6 0.0036 Hypothalamus GCGTTGCGTG 3.6 0.0036 E12.5 retina AAAAAATAAA (17) 9.4 0.0094 E12.5 retina AAAAAAAAGA (7) 1.9 0.0019 E12.5 retina GAGGGCTTCC (10) 1.9 0.0019 E12.5 retina GCGTTGCGTG 1.9 0.0019 E12.5 retina GGAAGCCCAG (3) 1.9 0.0019 E12.5 retina TTTTTTTTCC (11) 1.9 0.0019 E14.5 retina AGACACAAAT (3) 18.2 0.0182 E14.5 retina TTTTTTTTCC (11) 18.2 0.0182 E14.5 retina AAAAAATAAA (17) 5.5 0.0055 E14.5 retina AAAAAAAAGA (7) 3.6 0.0036 E14.5 retina GCGTTGCGTG 3.6 0.0036 E14.5 retina GTCTCCATCG (2) 1.8 0.0018 E16.5 retina TTTTTTTTCC (11) 36.2 0.0362 E16.5 retina AGACACAAAT (3) 10.9 0.0109 E16.5 retina AAAAAATAAA (17) 9.1 0.0091 E16.5 retina AATCCCTGCC (2) 1.8 0.0018 E16.5 retina GTCTCCATCG (2) 1.8 0.0018 E18.5 retina TTTTTTTTCC (11) 21.8 0.0218 E18.5 retina AAAAAATAAA (17) 16.4 0.0164 E18.5 retina AGACACAAAT (3) 3.6 0.0036 E18.5 retina GGAAGCCCAG (3) 1.8 0.0018 E18.5 retina GTCTCCATCG (2) 1.8 0.0018 P0.5 retina AGACACAAAT (3) 7.9 0.0079 P0.5 retina AAAAAAAAGA (7) 3.9 0.0039 P0.5 retina TTTTTTTTCC (11) 3.9 0.0039 P0.5 retina AAAAAATAAA (17) 2 0.002 P0.5 retina GCGTTGCGTG 2 0.002 P2.5 retina AAAAAATAAA (17) 12.3 0.0123 P2.5 retina TTTTTTTTCC (11) 5.3 0.0053 P2.5 retina AAAAAAAAGA (7) 3.5 0.0035 P2.5 retina GATCCTTACA (2) 3.5 0.0035 P2.5 retina GCGTTGCGTG 3.5 0.0035 P2.5 retina AATCCCTGCC (2) 1.8 0.0018 P2.5 retina AGACACAAAT (3) 1.8 0.0018 P4.5 retina AAAAAATAAA (17) 11.9 0.0119 P4.5 retina TTTTTTTTCC (11) 9.9 0.0099 P4.5 retina GCGTTGCGTG 5.9 0.0059 P4.5 retina AGACACAAAT (3) 2 0.002 P6.5 retina AAAAAATAAA (17) 10 0.01 P6.5 retina GCGTTGCGTG 5 0.005 P6.5 retina GATCCTTACA (2) 3.3 0.0033 P6.5 retina GTCTCCATCG (2) 3.3 0.0033 P6.5 retina TTTTTTTTCC (11) 3.3 0.0033 P6.5 retina AAAAAAAAGA (7) 1.7 0.0017 P6.5 retina AGACACAAAT (3) 1.7 0.0017 P6.5 retina GGAAGCCCAG (3) 1.7 0.0017 P10.5 crx- retina AGACACAAAT (3) 7.4 0.0074 P10.5 crx- retina AAAAAATAAA (17) 5.6 0.0056 P10.5 crx- retina AAAAAAAAGA (7) 1.9 0.0019 P10.5 crx- retina GCGTTGCGTG 1.9 0.0019 P10.5 crx+ retina GCGTTGCGTG 5.8 0.0058 P10.5 crx+ retina TTTTTTTTCC (11) 3.8 0.0038 P10.5 crx+ retina AAAAAAAAGA (7) 1.9 0.0019 P10.5 crx+ retina AAAAAATAAA (17) 1.9 0.0019 P10.5 crx+ retina AGACACAAAT (3) 1.9 0.0019 P10.5 crx+ retina GTCTCCATCG (2) 1.9 0.0019 Adult retinal GCGTTGCGTG 7.4 0.0074 Adult retinal GATCCTTACA (2) 1.9 0.0019 Adult retinal TTTTTTTTCC (11) 1.9 0.0019 ONL AAAAAATAAA (17) 23 0.023 ONL GATCCTTACA (2) 3.8 0.0038 ONL GCGTTGCGTG 1.9 0.0019 ONL TTTTTTTTCC (11) 1.9 0.0019