Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20242	1810044O22Rik	RIKEN cDNA 1810044O22 gene	8		66427
Gene Ontology	electron transport | integral to membrane | mitochondrion | outer membrane
Human Homolog	CYB5-M[cytochrome b5 outer mitochondrial membrane precursor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 113 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCACACG (29) 4.9 0.0049 P8 Cb GC CTTCTGTCTC (5) 3.3 0.0033 P8 Cb GC GGCTTTGGGG (8) 1.6 0.0016 P8 Cb GC TCACAACCAC 1.6 0.0016 Cb medulloblastoma CTTCTGTCTC (5) 4.6 0.0046 Cb medulloblastoma GTGGTGCACA (18) 4.6 0.0046 Cb medulloblastoma AATGGCAGGG 2.3 0.0023 Cb medulloblastoma CAGACATTCA 2.3 0.0023 Cb medulloblastoma GCCGACCCCG (2) 2.3 0.0023 Cb medulloblastoma GTGGCACACG (29) 2.3 0.0023 P8 GC+1d culture AATGGCAGGG 4.6 0.0046 P8 GC+1d culture GGCTTTGGGG (8) 2.3 0.0023 P8 GC+1d culture CTCATCACTG (3) 1.1 0.0011 P8 GC+1d culture CTTCTGTCTC (5) 1.1 0.0011 P8 GC+1d culture GAAGTGTGTG (4) 1.1 0.0011 P8 GC+1d culture GTGGCACACG (29) 1.1 0.0011 P8 GC+1d culture GTGGTGCACA (18) 1.1 0.0011 P8 GC+1d culture TCACAACCAC 1.1 0.0011 P8 GC+SHH+1d culture GTGGCACACG (29) 7 0.007 P8 GC+SHH+1d culture CTTCTGTCTC (5) 5.9 0.0059 P8 GC+SHH+1d culture GGCTTTGGGG (8) 4.7 0.0047 P8 GC+SHH+1d culture GTGGTGCACA (18) 4.7 0.0047 P8 GC+SHH+1d culture TCACAACCAC 2.3 0.0023 P8 GC+SHH+1d culture AAATCCGTCA 1.2 0.0012 P8 GC+SHH+1d culture AATGGCAGGG 1.2 0.0012 P8 GC+SHH+1d culture GAAGTGTGTG (4) 1.2 0.0012 3T3 fibroblasts GTGGCACACG (29) 35 0.035 3T3 fibroblasts GTGGTGCACA (18) 14 0.014 3T3 fibroblasts AATGGCAGGG 3.5 0.0035 E15 cortex GTGGCACACG (29) 69.3 0.0693 E15 cortex GTGGTGCACA (18) 24.7 0.0247 E15 cortex GGCTTTGGGG (8) 19.8 0.0198 E15 cortex AATGGCAGGG 4.9 0.0049 P1 cortex GTGGTGCACA (18) 13.6 0.0136 P1 cortex GTGGCACACG (29) 9.1 0.0091 P1 cortex CTTCTGTCTC (5) 4.5 0.0045 P1 cortex GGCTTTGGGG (8) 4.5 0.0045 P1 cortex TCACAACCAC 4.5 0.0045 Hypothalamus GTGGTGCACA (18) 3.6 0.0036 Hypothalamus TCACAACCAC 3.6 0.0036 Hypothalamus AAATCCGTCA 1.8 0.0018 Hypothalamus GCCGACCCCG (2) 1.8 0.0018 Hypothalamus TGAGGGAGCT (2) 1.8 0.0018 E12.5 retina GTGGCACACG (29) 13.1 0.0131 E12.5 retina AATGGCAGGG 3.8 0.0038 E12.5 retina ATTTCTCATA 3.8 0.0038 E12.5 retina GTGGTGCACA (18) 3.8 0.0038 E12.5 retina AAATCCGTCA 1.9 0.0019 E12.5 retina GGCTTTGGGG (8) 1.9 0.0019 E12.5 retina TCACAACCAC 1.9 0.0019 E14.5 retina GTGGCACACG (29) 18.2 0.0182 E14.5 retina GTGGTGCACA (18) 7.3 0.0073 E14.5 retina CTCATCACTG (3) 1.8 0.0018 E14.5 retina CTTCTGTCTC (5) 1.8 0.0018 E14.5 retina TCACAACCAC 1.8 0.0018 E16.5 retina GTGGCACACG (29) 5.4 0.0054 E16.5 retina ATTTCTCATA 3.6 0.0036 E16.5 retina GTGGTGCACA (18) 3.6 0.0036 E16.5 retina AATGGCAGGG 1.8 0.0018 E18.5 retina GTGGCACACG (29) 3.6 0.0036 E18.5 retina GTGGTGCACA (18) 3.6 0.0036 E18.5 retina TGCACACAGT (7) 1.8 0.0018 P0.5 retina GTGGCACACG (29) 5.9 0.0059 P0.5 retina AATGGCAGGG 3.9 0.0039 P0.5 retina GTGGTGCACA (18) 3.9 0.0039 P0.5 retina CTTCTGTCTC (5) 2 0.002 P0.5 retina GGCTTTGGGG (8) 2 0.002 P0.5 retina TGCACACAGT (7) 2 0.002 P2.5 retina GTGGCACACG (29) 8.8 0.0088 P2.5 retina GTGGTGCACA (18) 7 0.007 P2.5 retina AATGGCAGGG 3.5 0.0035 P2.5 retina CTTCTGTCTC (5) 3.5 0.0035 P2.5 retina GGCTTTGGGG (8) 3.5 0.0035 P2.5 retina ATTTCTCATA 1.8 0.0018 P4.5 retina GTGGCACACG (29) 13.9 0.0139 P4.5 retina GTGGTGCACA (18) 4 0.004 P4.5 retina CAGACATTCA 2 0.002 P4.5 retina GCCGACCCCG (2) 2 0.002 P4.5 retina TCACAACCAC 2 0.002 P6.5 retina GTGGCACACG (29) 6.7 0.0067 P6.5 retina AATGGCAGGG 5 0.005 P6.5 retina CTTCTGTCTC (5) 5 0.005 P6.5 retina GTGGTGCACA (18) 5 0.005 P6.5 retina GGCTTTGGGG (8) 3.3 0.0033 P6.5 retina TCACAACCAC 3.3 0.0033 P6.5 retina GCCGACCCCG (2) 1.7 0.0017 P10.5 crx- retina AATGGCAGGG 1.9 0.0019 P10.5 crx- retina ATTTCTCATA 1.9 0.0019 P10.5 crx- retina CTCATCACTG (3) 1.9 0.0019 P10.5 crx- retina CTTCTGTCTC (5) 1.9 0.0019 P10.5 crx- retina GCCGACCCCG (2) 1.9 0.0019 P10.5 crx- retina GGCTTTGGGG (8) 1.9 0.0019 P10.5 crx- retina GTGGCACACG (29) 1.9 0.0019 P10.5 crx+ retina GTGGCACACG (29) 9.6 0.0096 P10.5 crx+ retina GGCTTTGGGG (8) 7.7 0.0077 P10.5 crx+ retina CTTCTGTCTC (5) 5.8 0.0058 P10.5 crx+ retina GTGGTGCACA (18) 5.8 0.0058 P10.5 crx+ retina AATGGCAGGG 1.9 0.0019 P10.5 crx+ retina GAAGTGTGTG (4) 1.9 0.0019 P10.5 crx+ retina TCACAACCAC 1.9 0.0019 P10.5 crx+ retina TGAGGGAGCT (2) 1.9 0.0019 Adult retinal GTGGCACACG (29) 13 0.013 Adult retinal GTGGTGCACA (18) 9.3 0.0093 Adult retinal CTTCTGTCTC (5) 5.6 0.0056 Adult retinal AATGGCAGGG 3.7 0.0037 Adult retinal GGCTTTGGGG (8) 1.9 0.0019 Adult retinal TGAGGGAGCT (2) 1.9 0.0019 ONL GTGGTGCACA (18) 11.5 0.0115 ONL GTGGCACACG (29) 7.7 0.0077 ONL TGCACACAGT (7) 3.8 0.0038 ONL CAGACATTCA 1.9 0.0019 ONL GAAGTGTGTG (4) 1.9 0.0019 ONL GGCTTTGGGG (8) 1.9 0.0019