Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.202749
Dpp8
dipeptidylpeptidase 8
9
74388
Mm.202749
2310004I03Rik
RIKEN cDNA 2310004I03 gene
9
76430
Mm.202749
A430110M15Rik
RIKEN cDNA A430110M15 gene
9
319972
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
P8 Cb GC
CTTATGACAT
(
3
)
1.6
0.0016
P8 Cb GC
TATTCTGAAA
(
5
)
1.6
0.0016
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
Cb medulloblastoma
CCTCTCCAGT
(
3
)
6.9
0.0069
Cb medulloblastoma
CTTATGACAT
(
3
)
2.3
0.0023
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+1d culture
CAGGTCTGCA
(
4
)
1.1
0.0011
P8 GC+1d culture
CTTATGACAT
(
3
)
1.1
0.0011
P8 GC+1d culture
TATTCTGAAA
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
CCTCTCCAGT
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
CTTATGACAT
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TATTCTGAAA
(
5
)
2.3
0.0023
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
P1 cortex
CTTATGACAT
(
3
)
4.5
0.0045
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
Hypothalamus
CAGGTCTGCA
(
4
)
1.8
0.0018
Hypothalamus
CCTCTCCAGT
(
3
)
1.8
0.0018
Hypothalamus
TATTCTGAAA
(
5
)
1.8
0.0018
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E12.5 retina
CTTATGACAT
(
3
)
1.9
0.0019
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E14.5 retina
TATTCTGAAA
(
5
)
1.8
0.0018
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E16.5 retina
CCTCTCCAGT
(
3
)
1.8
0.0018
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
TATTCTGAAA
(
5
)
1.8
0.0018
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
CTTATGACAT
(
3
)
2
0.002
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P2.5 retina
TATTCTGAAA
(
5
)
3.5
0.0035
P2.5 retina
CCTCTCCAGT
(
3
)
1.8
0.0018
P2.5 retina
CTTATGACAT
(
3
)
1.8
0.0018
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P4.5 retina
CTTATGACAT
(
3
)
2
0.002
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P6.5 retina
CTTATGACAT
(
3
)
5
0.005
P6.5 retina
CCTCTCCAGT
(
3
)
3.3
0.0033
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
CCTCTCCAGT
(
3
)
3.7
0.0037
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
CCTCTCCAGT
(
3
)
3.8
0.0038
P10.5 crx+ retina
CAGGTCTGCA
(
4
)
1.9
0.0019
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
CCTCTCCAGT
(
3
)
3.7
0.0037
Adult retinal
CAGGTCTGCA
(
4
)
1.9
0.0019
Adult retinal
CTTATGACAT
(
3
)
1.9
0.0019
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
