Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.202774	4833412C15Rik	RIKEN cDNA 4833412C15 gene	15		74613
Mm.202774	AU021833	expressed sequence AU021833	15		105971
Mm.202774	3010033E01Rik	RIKEN cDNA 3010033E01 gene			77135
Mm.202774	Rbm9	RNA binding motif protein 9	15		93686
Gene Ontology	biological_process unknown | nucleus | protein binding | RNA binding
Human Homolog	RBM9[RNA binding motif protein 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGCTGGCTT (5) 17.9 0.0179 P8 Cb GC AGGCCTGGCT (6) 6.5 0.0065 P8 Cb GC CGGATGCTTG (4) 3.3 0.0033 P8 Cb GC TCCTCAAGAT (4) 3.3 0.0033 P8 Cb GC TATCAGCTCC (5) 1.6 0.0016 P8 Cb GC TCCCTGAATT (5) 1.6 0.0016 Cb medulloblastoma TTGCTGGCTT (5) 20.8 0.0208 Cb medulloblastoma AGGCCTGGCT (6) 11.6 0.0116 Cb medulloblastoma TATCAGCTCC (5) 4.6 0.0046 Cb medulloblastoma TATGTACATA (12) 2.3 0.0023 Cb medulloblastoma TTGCTGCTTT (4) 2.3 0.0023 P8 GC+1d culture TTGCTGGCTT (5) 36.5 0.0365 P8 GC+1d culture AGGCCTGGCT (6) 9.1 0.0091 P8 GC+1d culture CGGATGCTTG (4) 4.6 0.0046 P8 GC+1d culture TATCAGCTCC (5) 3.4 0.0034 P8 GC+1d culture TTGCTGCTTT (4) 3.4 0.0034 P8 GC+1d culture GGGCCCTTTA (7) 1.1 0.0011 P8 GC+1d culture TCTCTTAGGG (4) 1.1 0.0011 P8 GC+SHH+1d culture TTGCTGGCTT (5) 23.4 0.0234 P8 GC+SHH+1d culture AGGCCTGGCT (6) 8.2 0.0082 P8 GC+SHH+1d culture TATCAGCTCC (5) 4.7 0.0047 P8 GC+SHH+1d culture CGGATGCTTG (4) 2.3 0.0023 P8 GC+SHH+1d culture TTGCTGCTTT (4) 2.3 0.0023 P8 GC+SHH+1d culture TCCCTGAATT (5) 1.2 0.0012 3T3 fibroblasts AGGCCTGGCT (6) 14 0.014 3T3 fibroblasts TTGCTGGCTT (5) 14 0.014 3T3 fibroblasts TATCAGCTCC (5) 7 0.007 3T3 fibroblasts GAGAGTAATA (9) 3.5 0.0035 E15 cortex TTGCTGGCTT (5) 29.7 0.0297 E15 cortex CCCTCGCCCC (8) 14.8 0.0148 E15 cortex AGGCCTGGCT (6) 4.9 0.0049 P1 cortex TATCAGCTCC (5) 18.2 0.0182 P1 cortex TTGCTGGCTT (5) 18.2 0.0182 P1 cortex AGGCCTGGCT (6) 13.6 0.0136 Hypothalamus TTGCTGGCTT (5) 7.2 0.0072 Hypothalamus GGGCCCTTTA (7) 1.8 0.0018 Hypothalamus TATGTACATA (12) 1.8 0.0018 E12.5 retina AGGCCTGGCT (6) 1.9 0.0019 E12.5 retina GGGCCCTTTA (7) 1.9 0.0019 E12.5 retina TATCAGCTCC (5) 1.9 0.0019 E12.5 retina TATGTACATA (12) 1.9 0.0019 E12.5 retina TCTCTTAGGG (4) 1.9 0.0019 E12.5 retina TTCTAAAGTC (9) 1.9 0.0019 E12.5 retina TTGCTGGCTT (5) 1.9 0.0019 E14.5 retina TTGCTGGCTT (5) 3.6 0.0036 E14.5 retina AGGCCTGGCT (6) 1.8 0.0018 E14.5 retina CGGATGCTTG (4) 1.8 0.0018 E14.5 retina GGGCCCTTTA (7) 1.8 0.0018 E14.5 retina TATCAGCTCC (5) 1.8 0.0018 E14.5 retina TCCCTGAATT (5) 1.8 0.0018 E14.5 retina TTCTAAAGTC (9) 1.8 0.0018 E16.5 retina TTGCTGGCTT (5) 10.9 0.0109 E16.5 retina TTCTAAAGTC (9) 3.6 0.0036 E16.5 retina TATGTACATA (12) 1.8 0.0018 E16.5 retina TCTCTTAGGG (4) 1.8 0.0018 E16.5 retina TTGCTGCTTT (4) 1.8 0.0018 E18.5 retina TTGCTGGCTT (5) 10.9 0.0109 E18.5 retina AGGCCTGGCT (6) 1.8 0.0018 E18.5 retina GGGCCCTTTA (7) 1.8 0.0018 E18.5 retina TTGCAAATGC (5) 1.8 0.0018 E18.5 retina TTGCTGCTTT (4) 1.8 0.0018 P0.5 retina TTGCTGGCTT (5) 3.9 0.0039 P0.5 retina AGGCCTGGCT (6) 2 0.002 P0.5 retina CGGATGCTTG (4) 2 0.002 P0.5 retina GAGAGTAATA (9) 2 0.002 P0.5 retina TATCAGCTCC (5) 2 0.002 P2.5 retina TTGCTGGCTT (5) 12.3 0.0123 P2.5 retina AGGCCTGGCT (6) 3.5 0.0035 P2.5 retina CGGATGCTTG (4) 3.5 0.0035 P2.5 retina TATGTACATA (12) 3.5 0.0035 P2.5 retina GGGCCCTTTA (7) 1.8 0.0018 P2.5 retina TATCAGCTCC (5) 1.8 0.0018 P4.5 retina CGGATGCTTG (4) 2 0.002 P4.5 retina TCCCTGAATT (5) 2 0.002 P4.5 retina TTGCAAATGC (5) 2 0.002 P4.5 retina TTGCTGCTTT (4) 2 0.002 P4.5 retina TTGCTGGCTT (5) 2 0.002 P6.5 retina AAGCGGGAGT (6) 5 0.005 P6.5 retina TTGCTGGCTT (5) 5 0.005 P6.5 retina TTGCAAATGC (5) 3.3 0.0033 P6.5 retina AGGCCTGGCT (6) 1.7 0.0017 P6.5 retina GAGAGTAATA (9) 1.7 0.0017 P6.5 retina TATGTACATA (12) 1.7 0.0017 P10.5 crx- retina TTGCTGGCTT (5) 14.9 0.0149 P10.5 crx- retina CGGATGCTTG (4) 1.9 0.0019 P10.5 crx- retina GAGAGTAATA (9) 1.9 0.0019 P10.5 crx- retina TTCTAAAGTC (9) 1.9 0.0019 P10.5 crx+ retina TTGCTGCTTT (4) 3.8 0.0038 P10.5 crx+ retina TTGCTGGCTT (5) 3.8 0.0038 P10.5 crx+ retina AGGCCTGGCT (6) 1.9 0.0019 P10.5 crx+ retina TATGTACATA (12) 1.9 0.0019 P10.5 crx+ retina TCCTCAAGAT (4) 1.9 0.0019 Adult retinal TTGCTGGCTT (5) 5.6 0.0056 Adult retinal GGGCCCTTTA (7) 3.7 0.0037 Adult retinal TTGCTGCTTT (4) 3.7 0.0037 Adult retinal TTGCAAATGC (5) 1.9 0.0019 ONL TTGCTGGCTT (5) 3.8 0.0038 ONL TATGTACATA (12) 1.9 0.0019