| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGAGAGAGAA (2) AGGCCCAGGG (2) CTGTACCACA (2)
| 8.2 | 0.0082 |
| Cb medulloblastoma | AGAGAGAGAA (2) AGGCCCAGGG (2) GAACCCCCAG
| 20.8 | 0.0208 |
| P8 GC+1d culture | AGAGAGAGAA (2) AGGCCCAGGG (2) CTGTACCACA (2) GCGGCGCTCA (2)
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | AGAGAGAGAA (2) AGGCCCAGGG (2) CTGTACCACA (2)
| 5.8 | 0.0058 |
| 3T3 fibroblasts | AGGCCCAGGG (2) CTGTACCACA (2)
| 17.5 | 0.0175 |
| E15 cortex | AGAGAGAGAA (2)
| 4.9 | 0.0049 |
| P1 cortex | AGGCCCAGGG (2)
| 9.1 | 0.0091 |
| Hypothalamus | AGAGAGAGAA (2) AGGCCCAGGG (2)
| 9 | 0.009 |
| E12.5 retina | AGAGAGAGAA (2) AGGCCCAGGG (2) CTGTACCACA (2) GTGTTTGCAA
| 9.5 | 0.0095 |
| E14.5 retina | AGAGAGAGAA (2) AGGCCCAGGG (2)
| 3.6 | 0.0036 |
| E16.5 retina | AGAGAGAGAA (2) AGGCCCAGGG (2) CTGTACCACA (2)
| 16.2 | 0.0162 |
| E18.5 retina | AGGCCCAGGG (2) GTGTTTGCAA
| 3.6 | 0.0036 |
| P2.5 retina | AGGCCCAGGG (2)
| 5.3 | 0.0053 |
| P4.5 retina | AGGCCCAGGG (2) CTGTACCACA (2)
| 8 | 0.008 |
| P6.5 retina | AGGCCCAGGG (2) GCGGCGCTCA (2)
| 10 | 0.01 |
| P10.5 crx- retina | AGGCCCAGGG (2) CTGTACCACA (2) GCGGCGCTCA (2)
| 11.2 | 0.0112 |
| P10.5 crx+ retina | AGAGAGAGAA (2) AGGCCCAGGG (2) CTGTACCACA (2) GAACCCCCAG
| 15.3 | 0.0153 |
| Adult retinal | CTGTACCACA (2)
| 3.7 | 0.0037 |
| ONL | GTGTTTGCAA
| 1.9 | 0.0019 |