Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.203921	Otub1	OTU domain, ubiquitin aldehyde binding 1	19		107260
Gene Ontology	cysteine-type peptidase activity | hydrolase activity | immune response | peptidase activity
Human Homolog	OTUB1[OTU domain, ubiquitin aldehyde binding 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGGTCTCA 8.2 0.0082 P8 Cb GC GAAGGTTCTA (2) 4.9 0.0049 P8 Cb GC TACAGAGGGT 1.6 0.0016 Cb medulloblastoma TGGGGTCTCA 13.9 0.0139 Cb medulloblastoma GAAGGTTCTA (2) 6.9 0.0069 Cb medulloblastoma TACAGAGGGT 2.3 0.0023 P8 GC+1d culture TTTTATTAAA (2) 3.4 0.0034 P8 GC+1d culture TACAGAGGGT 2.3 0.0023 P8 GC+1d culture TGGGGTCTCA 2.3 0.0023 P8 GC+1d culture GAAGGTTCTA (2) 1.1 0.0011 P8 GC+SHH+1d culture TGGGGTCTCA 10.5 0.0105 P8 GC+SHH+1d culture GAAGGTTCTA (2) 7 0.007 P8 GC+SHH+1d culture TTTTATTAAA (2) 5.9 0.0059 P8 GC+SHH+1d culture TACAGAGGGT 3.5 0.0035 3T3 fibroblasts GAAGGTTCTA (2) 3.5 0.0035 3T3 fibroblasts TACAGAGGGT 3.5 0.0035 E15 cortex TGGGGTCTCA 14.8 0.0148 E15 cortex GAAGGTTCTA (2) 4.9 0.0049 E15 cortex TACAGAGGGT 4.9 0.0049 P1 cortex TGGGGTCTCA 9.1 0.0091 P1 cortex GAAGGTTCTA (2) 4.5 0.0045 P1 cortex TTTTATTAAA (2) 4.5 0.0045 Hypothalamus TGGGGTCTCA 14.5 0.0145 Hypothalamus GAAGGTTCTA (2) 5.4 0.0054 Hypothalamus TACAGAGGGT 1.8 0.0018 E12.5 retina GAAGGTTCTA (2) 15 0.015 E12.5 retina TACAGAGGGT 11.3 0.0113 E12.5 retina TGGGGTCTCA 9.4 0.0094 E12.5 retina TTTTATTAAA (2) 5.6 0.0056 E14.5 retina GAAGGTTCTA (2) 7.3 0.0073 E14.5 retina TGGGGTCTCA 3.6 0.0036 E14.5 retina TTTTATTAAA (2) 1.8 0.0018 E16.5 retina GAAGGTTCTA (2) 7.2 0.0072 E16.5 retina TTTTATTAAA (2) 5.4 0.0054 E16.5 retina TGGGGTCTCA 3.6 0.0036 E18.5 retina GAAGGTTCTA (2) 10.9 0.0109 E18.5 retina TACAGAGGGT 10.9 0.0109 E18.5 retina TGGGGTCTCA 3.6 0.0036 E18.5 retina TTTTATTAAA (2) 1.8 0.0018 P0.5 retina GAAGGTTCTA (2) 11.8 0.0118 P0.5 retina TGGGGTCTCA 9.8 0.0098 P2.5 retina TGGGGTCTCA 10.6 0.0106 P2.5 retina GAAGGTTCTA (2) 8.8 0.0088 P2.5 retina TACAGAGGGT 8.8 0.0088 P2.5 retina TTTTATTAAA (2) 5.3 0.0053 P4.5 retina TGGGGTCTCA 19.8 0.0198 P4.5 retina TTTTATTAAA (2) 7.9 0.0079 P4.5 retina GAAGGTTCTA (2) 4 0.004 P4.5 retina TACAGAGGGT 4 0.004 P6.5 retina TGGGGTCTCA 16.7 0.0167 P6.5 retina GAAGGTTCTA (2) 5 0.005 P6.5 retina TTTTATTAAA (2) 5 0.005 P6.5 retina TACAGAGGGT 1.7 0.0017 P10.5 crx- retina TGGGGTCTCA 14.9 0.0149 P10.5 crx- retina GAAGGTTCTA (2) 1.9 0.0019 P10.5 crx- retina TTTTATTAAA (2) 1.9 0.0019 P10.5 crx+ retina TGGGGTCTCA 9.6 0.0096 P10.5 crx+ retina GAAGGTTCTA (2) 3.8 0.0038 P10.5 crx+ retina TTTTATTAAA (2) 1.9 0.0019 Adult retinal TACAGAGGGT 3.7 0.0037 Adult retinal TGGGGTCTCA 1.9 0.0019 ONL TGGGGTCTCA 3.8 0.0038 ONL GAAGGTTCTA (2) 1.9 0.0019 ONL TACAGAGGGT 1.9 0.0019