Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2041	Muc2	mucin 2	7	7 68.99 cM	17831
Mm.2041	Muc5ac	mucin 5, subtypes A and C, tracheobronchial/gastric	7	7 69.0 cM	17833
Gene Ontology	protein binding
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 128 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATTTTATGA GGGGCACCTG (3) GTTTGTTTGG TACTCTGCTC TGAACTGTAA TTCTCTGCCA (3) 11.3 0.0113 Cb medulloblastoma AGCAAAAAAA (2) CCCACCTCCT (3) GATTTTATGA GCCCAAAAAA GGGAGAAAAA (6) TGAACTGTAA 41.5 0.0415 P8 GC+1d culture AGCAAAAAAA (2) CCCACCTCCT (3) CCTACACACA (3) GATTTTATGA GGGAGAAAAA (6) GGGGCACCTG (3) GTTTGTTTGG TGAACTGTAA TGCCTCAAAA 18 0.018 P8 GC+SHH+1d culture AGCAAAAAAA (2) GACCACAAAA GATTTTATGA GGGAGAAAAA (6) GTTTGTTTGG TACTCTGCTC TGAACTGTAA TTCTCTGCCA (3) 21.3 0.0213 3T3 fibroblasts GGGGCACCTG (3) 10.5 0.0105 E15 cortex AGCAAAAAAA (2) GGGGCACCTG (3) 14.8 0.0148 P1 cortex ACTAGGTTGG (2) GATTTTATGA GGGGCACCTG (3) TGAACTGTAA TGCCTCAAAA 27.1 0.0271 Hypothalamus ACTAGGTTGG (2) AGCAAAAAAA (2) CCTACACACA (3) GATTTTATGA TAAGTGTGAC (2) TGAACTGTAA 16.2 0.0162 E12.5 retina AAAACTCACC (2) ACTAGGTTGG (2) CCTACACACA (3) GATTTTATGA GGGAGAAAAA (6) TGAACTGTAA 24.5 0.0245 E14.5 retina AGCAAAAAAA (2) CCTACACACA (3) GATTTTATGA GGGAGAAAAA (6) TAAGTGTGAC (2) TACTCTGCTC TGAACTGTAA TGTGGAAAAA (3) 34.5 0.0345 E16.5 retina ACAAGGTGTC (2) CCCACCTCCT (3) GATTTTATGA GGGAGAAAAA (6) GTGGCACTGG (2) 25.3 0.0253 E18.5 retina AGCAAAAAAA (2) GATTTTATGA GCCCAAAAAA GGGGCACCTG (3) GTGGCACTGG (2) TGTGGAAAAA (3) 27.2 0.0272 P0.5 retina AAAACTCACC (2) ACTAGGTTGG (2) CCCACCTCCT (3) GACCACAAAA GATTTTATGA GCCCAAAAAA GGGGCACCTG (3) GTTTGTTTGG 29.6 0.0296 P2.5 retina AGCAAAAAAA (2) CCTACACACA (3) GACCACAAAA GATTTTATGA GGGGCACCTG (3) GTTTGTTTGG TGTGGAAAAA (3) TTCTCTGCCA (3) 33.7 0.0337 P4.5 retina AGCAAAAAAA (2) CCTACACACA (3) GACCACAAAA GATTTTATGA GTTTGTTTGG TGAACTGTAA TGCCTCAAAA TGTGGAAAAA (3) TTCTCTGCCA (3) 39.7 0.0397 P6.5 retina AGCAAAAAAA (2) CCCACCTCCT (3) GACCACAAAA GATTTTATGA GGGGCACCTG (3) GTGGCACTGG (2) GTTTGTTTGG TTCTCTGCCA (3) 41.8 0.0418 P10.5 crx- retina AAAACTCACC (2) AAACTGAAAG (2) ACAAGGTGTC (2) CCTACACACA (3) GACCACAAAA GATTTTATGA 26.2 0.0262 P10.5 crx+ retina AGCAAAAAAA (2) CCTACACACA (3) GACCACAAAA GATTTTATGA TAAGTGTGAC (2) TGCCTCAAAA 44.2 0.0442 Adult retinal AAACTGAAAG (2) AAGGACATTT ACAAGGTGTC (2) GACCACAAAA GATTTTATGA GCCCAAAAAA TAAGTGTGAC (2) TGAACTGTAA 37.3 0.0373 ONL AAACTGAAAG (2) ACAAGGTGTC (2) AGCAAAAAAA (2) GACCACAAAA GATTTTATGA GGGAGAAAAA (6) GTTTGTTTGG 47.8 0.0478