Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20425	Bsn	bassoon	9	9 (9 60.0 cM)	12217
Gene Ontology	biological_process unknown | cytoskeleton | integral to membrane | metal ion binding | peripheral to membrane of membrane fraction | synapse | synapse | synaptosome
Human Homolog	BSN[bassoon (presynaptic cytomatrix protein)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 20 In Situ Hybridization Images

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SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma ACCTTGTGAA (2) 2.3 0.0023 Cb medulloblastoma CACAGGTGGC (5) 2.3 0.0023 Cb medulloblastoma CCTCCCAAAG (3) 2.3 0.0023 P8 GC+1d culture ACCTTGTGAA (2) 5.7 0.0057 P8 GC+1d culture AGAATGAAAT (2) 2.3 0.0023 P8 GC+1d culture CCTCCCAAAG (3) 1.1 0.0011 P8 GC+SHH+1d culture ACCTTGTGAA (2) 1.2 0.0012 P8 GC+SHH+1d culture CACAGGTGGC (5) 1.2 0.0012 3T3 fibroblasts CCTCCCAAAG (3) 3.5 0.0035 E15 cortex CCTCCCAAAG (3) 9.9 0.0099 E15 cortex AGTGTGTGTG (14) 4.9 0.0049 P1 cortex ACCTTGTGAA (2) 4.5 0.0045 Hypothalamus CACAGGTGGC (5) 1.8 0.0018 Hypothalamus CCTCCCAAAG (3) 1.8 0.0018 E12.5 retina AGAATGAAAT (2) 1.9 0.0019 E12.5 retina CACAGGTGGC (5) 1.9 0.0019 E12.5 retina CCTCCCAAAG (3) 1.9 0.0019 E14.5 retina ACCTTGTGAA (2) 3.6 0.0036 E14.5 retina CACAGGTGGC (5) 3.6 0.0036 E14.5 retina AGTGTGTGTG (14) 1.8 0.0018 E14.5 retina CCTCCCAAAG (3) 1.8 0.0018 E16.5 retina CCTCCCAAAG (3) 9.1 0.0091 E16.5 retina CACAGGTGGC (5) 3.6 0.0036 E16.5 retina AGAATGAAAT (2) 1.8 0.0018 E16.5 retina AGTGTGTGTG (14) 1.8 0.0018 P0.5 retina CCTCCCAAAG (3) 3.9 0.0039 P6.5 retina ACCTTGTGAA (2) 3.3 0.0033 P10.5 crx- retina ACCTTGTGAA (2) 3.7 0.0037 P10.5 crx- retina AGAATGAAAT (2) 1.9 0.0019 P10.5 crx- retina CCTCCCAAAG (3) 1.9 0.0019 P10.5 crx+ retina ACCTTGTGAA (2) 3.8 0.0038 P10.5 crx+ retina CACAGGTGGC (5) 3.8 0.0038 P10.5 crx+ retina CCTCCCAAAG (3) 1.9 0.0019 Adult retinal ACCTTGTGAA (2) 1.9 0.0019 Adult retinal CCTCCCAAAG (3) 1.9 0.0019 ONL AGTGTGTGTG (14) 5.7 0.0057