Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.204834	E130014H10Rik	RIKEN cDNA E130014H10 gene	15		319608
Mm.204834	Slc1a3	solute carrier family 1 (glial high affinity glutamate transporter), member 3	15	15 6.7 cM	20512
Gene Ontology	carrier activity | carrier activity | dicarboxylic acid transport | integral to membrane | integral to plasma membrane | integral to plasma membrane | membrane | organic acid:sodium symporter activity | protein targeting | sodium:dicarboxylate symporter activity | symporter activity | transport | transport
Human Homolog	SLC1A3[solute carrier family 1 (glial high affinity glutamate transporter), member 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGACCCTCCT AGGATCTCAG (3) TATAGAAAGG (2) TCCATCCGAA (2) 31 0.031 Cb medulloblastoma AACTGAAGAA (3) AGACCCTCCT AGGATCTCAG (3) GAGACTCTGA (3) TATAGAAAGG (2) TTATTTTCAA (2) 32.3 0.0323 P8 GC+1d culture AGACCCTCCT AGGATCTCAG (3) TATAGAAAGG (2) TCCATCCGAA (2) 9.1 0.0091 P8 GC+SHH+1d culture AGACCCTCCT TATAGAAAGG (2) 18.7 0.0187 3T3 fibroblasts GAGACTCTGA (3) 3.5 0.0035 P1 cortex AGGATCTCAG (3) 9.1 0.0091 Hypothalamus AGACCCTCCT AGGATCTCAG (3) GAGACTCTGA (3) TATAGAAAGG (2) TTATTTTCAA (2) 12.6 0.0126 E12.5 retina AGACCCTCCT 13.1 0.0131 E14.5 retina AGACCCTCCT TATAGAAAGG (2) TCCATCCGAA (2) 7.2 0.0072 E16.5 retina AACTGAAGAA (3) AGACCCTCCT GAGACTCTGA (3) TATAGAAAGG (2) 18 0.018 E18.5 retina AGACCCTCCT 5.5 0.0055 P0.5 retina AGACCCTCCT TATAGAAAGG (2) 7.9 0.0079 P2.5 retina AGACCCTCCT TATAGAAAGG (2) 15.8 0.0158 P4.5 retina AGACCCTCCT TATAGAAAGG (2) 13.9 0.0139 P6.5 retina AGACCCTCCT AGGATCTCAG (3) TATAGAAAGG (2) 8.4 0.0084 P10.5 crx- retina AGACCCTCCT AGGATCTCAG (3) GAGACTCTGA (3) TATAGAAAGG (2) 18.6 0.0186 P10.5 crx+ retina AGACCCTCCT AGGATCTCAG (3) GAGACTCTGA (3) TATAGAAAGG (2) 23 0.023 Adult retinal AGACCCTCCT 1.9 0.0019 ONL AACTGAAGAA (3) AGACCCTCCT 7.6 0.0076