Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.204969	Spna2	spectrin alpha 2	2	2 18.0 cM	20740
Gene Ontology	actin binding | calcium ion binding | calmodulin binding | cytoskeleton | membrane
Human Homolog	SPTAN1[spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 112 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AAGAAAGGGG (3) CCTTTAATCC (3) GTGGAGGAAG TAAAAAAAAA (3) TAAAAGAAAA TCAGAACAAG (3) TTTGAGCCAG 327.8 0.3278 Cb medulloblastoma AAAAAAAAAA (2) AGAGGATTTT CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA 1012.8 1.0128 P8 GC+1d culture AAAAAAAAAA (2) AAGAAAGGGG (3) AAGATGCAGG CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA TTTGAGCCAG 331 0.331 P8 GC+SHH+1d culture AAAAAAAAAA (2) AGAGGATTTT CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA TCAGAACAAG (3) TTAAAGAAAA 435.8 0.4358 3T3 fibroblasts AAAAAAAAAA (2) CCTTTAATCC (3) TAAAAAAAAA (3) 105.1 0.1051 E15 cortex AAAAAAAAAA (2) CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA TTTGAGCCAG 291.9 0.2919 P1 cortex AAAAAAAAAA (2) CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA TTTGAGCCAG 468 0.468 Hypothalamus AAAAAAAAAA (2) AAGATGCAGG CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA TCAGAACAAG (3) TTAAAGAAAA TTTGAGCCAG 195.6 0.1956 E12.5 retina AAAAAAAAAA (2) CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA 253.4 0.2534 E14.5 retina AAAAAAAAAA (2) AAGATGCAGG CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA TACATAGCTG TCAGAACAAG (3) 284.2 0.2842 E16.5 retina AAAAAAAAAA (2) CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA TACATAGCTG 159.3 0.1593 E18.5 retina AAAAAAAAAA (2) AAGATGCAGG AGAGGATTTT CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA TTAAAGAAAA 531 0.531 P0.5 retina AAAAAAAAAA (2) CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA 235.6 0.2356 P2.5 retina AAAAAAAAAA (2) CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA 498.1 0.4981 P4.5 retina AAAAAAAAAA (2) AGAGGATTTT CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA 499.3 0.4993 P6.5 retina AAAAAAAAAA (2) AAGAAAGGGG (3) CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA TTAAAGAAAA TTTGAGCCAG 433.6 0.4336 P10.5 crx- retina AAAAAAAAAA (2) CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA 137.5 0.1375 P10.5 crx+ retina AAAAAAAAAA (2) AGAGGATTTT CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA 174.9 0.1749 Adult retinal AAAAAAAAAA (2) CCTTTAATCC (3) GTGGAGGAAG TAAAAAAAAA (3) TAAAAGAAAA TCAGAACAAG (3) TTTGAGCCAG 216.7 0.2167 ONL AAAAAAAAAA (2) CCTTTAATCC (3) TAAAAAAAAA (3) TAAAAGAAAA TACATAGCTG 239.4 0.2394