Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.205196
A130026P03Rik
RIKEN cDNA A130026P03 gene
9
319268
Mm.205196
2410076I21Rik
RIKEN cDNA 2410076I21 gene
9
73673
Human Homolog
LOC283677[hypothetical LOC283677]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
TACTTGTGTT (
6
)
14.7
0.0147
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
TACTTGTGTT (
6
)
55.5
0.0555
Cb medulloblastoma
AAATCAATGT
(
4
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
TACTTGTGTT (
6
)
18.3
0.0183
P8 GC+1d culture
ATTTGACAAG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
TACTTGTGTT (
6
)
9.4
0.0094
P8 GC+SHH+1d culture
AAATCAATGT
(
4
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
TACTTGTGTT (
6
)
7
0.007
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
TACTTGTGTT (
6
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
TACTTGTGTT (
6
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
TACTTGTGTT (
6
)
38
0.038
Hypothalamus
AAATCAATGT
(
4
)
1.8
0.0018
Hypothalamus
ATTTGACAAG
(
4
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
TACTTGTGTT (
6
)
5.6
0.0056
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
TATGCAACTA
(
6
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
TACTTGTGTT (
6
)
7.2
0.0072
E16.5 retina
ATTTGACAAG
(
4
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
TACTTGTGTT (
6
)
12.7
0.0127
E18.5 retina
TATGCAACTA
(
6
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
TACTTGTGTT (
6
)
9.8
0.0098
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
TACTTGTGTT (
6
)
12.3
0.0123
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
TACTTGTGTT (
6
)
11.9
0.0119
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
TACTTGTGTT (
6
)
15
0.015
P6.5 retina
ATTTGACAAG
(
4
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
TACTTGTGTT (
6
)
27.9
0.0279
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
TACTTGTGTT (
6
)
25
0.025
P10.5 crx+ retina
TATGCAACTA
(
6
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
TACTTGTGTT (
6
)
24.1
0.0241
Adult retinal
ATTTGACAAG
(
4
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
TACTTGTGTT (
6
)
19.2
0.0192
