Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.205335	Rab11fip1	RAB11 family interacting protein 1 (class I)	8		75767
Human Homolog	RAB11FIP1[RAB11 family interacting protein 1 (class I)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TCTGTCCTGC 4.9 0.0049 P8 Cb GC ATTTTTTTTT (36) 1.6 0.0016 P8 Cb GC CAGACAAAAT (4) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma TCTGTCCTGC 4.6 0.0046 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture TCTGTCCTGC 3.4 0.0034 P8 GC+1d culture ATTTTTTTTT (36) 1.1 0.0011 P8 GC+1d culture CAGACAAAAT (4) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture TCTGTCCTGC 4.7 0.0047 P8 GC+SHH+1d culture ATTTTTTTTT (36) 3.5 0.0035 P8 GC+SHH+1d culture CAGACAAAAT (4) 2.3 0.0023 P8 GC+SHH+1d culture TATATTTTTG (6) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts TGCCTGGGTG (3) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex TCTGTCCTGC 14.8 0.0148 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex ATTTTTTTTT (36) 4.5 0.0045 P1 cortex CAGACAAAAT (4) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus TCTGTCCTGC 5.4 0.0054 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina TCTGTCCTGC 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina ATTTTTTTTT (36) 1.8 0.0018 E14.5 retina TATATTTTTG (6) 1.8 0.0018 E14.5 retina TCTGTCCTGC 1.8 0.0018 E14.5 retina TGCCTGGGTG (3) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina TCTGTCCTGC 5.4 0.0054 E16.5 retina CAGACAAAAT (4) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina CAGACAAAAT (4) 3.6 0.0036 E18.5 retina TCTGTCCTGC 3.6 0.0036 E18.5 retina ATTTTTTTTT (36) 1.8 0.0018 E18.5 retina TATATTTTTG (6) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina TCTGTCCTGC 9.8 0.0098 P0.5 retina ATTTTTTTTT (36) 3.9 0.0039 P0.5 retina TGCCTGGGTG (3) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina TCTGTCCTGC 7 0.007 P2.5 retina ATTTTTTTTT (36) 3.5 0.0035 P2.5 retina CAGACAAAAT (4) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina ATTTTTTTTT (36) 4 0.004 P4.5 retina TCTGTCCTGC 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina TCTGTCCTGC 8.3 0.0083 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina TCTGTCCTGC 3.7 0.0037 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina TCTGTCCTGC 5.8 0.0058 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal TCTGTCCTGC 3.7 0.0037 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL CAGACAAAAT (4) 1.9 0.0019 ONL TATATTTTTG (6) 1.9 0.0019 ONL TCTGTCCTGC 1.9 0.0019