Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2055	Mmp12	matrix metalloproteinase 12	9	9 1.0 cM	17381
Gene Ontology	calcium ion binding | extracellular matrix | extracellular space | hydrolase activity | macrophage elastase activity | metalloendopeptidase activity | metallopeptidase activity | proteolysis and peptidolysis | zinc ion binding
Human Homolog	MMP12[matrix metalloproteinase 12 (macrophage elastase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGAGGCCTG TCAAGATTTT TTTGGTTTTC 8.1 0.0081 Cb medulloblastoma CTAGATAATT (3) GACCCTGCTT (3) TCAAGATTTT 11.5 0.0115 P8 GC+1d culture CTTTTATCCT GAAAGGACAG (2) TCAAGATTTT TTTGGTTTTC TTTTGTTTTC (2) 39.9 0.0399 P8 GC+SHH+1d culture CAGCAGTCCT (2) TCAAGATTTT TTTTGTTTTC (2) 26.9 0.0269 3T3 fibroblasts CAGCACCTCT CTTTTATCCT 7 0.007 E15 cortex CAGCAGTCCT (2) TAGAGGCCTG 9.8 0.0098 Hypothalamus GAAAGGACAG (2) TCAAGATTTT 10.9 0.0109 E12.5 retina CCCTTTCAAA TCAAGATTTT TGCTGGGATT (2) TTTGGTTTTC 16.9 0.0169 E14.5 retina CAGCAGTCCT (2) CCCTTTCAAA GACCCTGCTT (3) TCAAGATTTT 21.8 0.0218 E16.5 retina CAGCACCTCT CAGCAGTCCT (2) TAGAGGCCTG TCAAGATTTT 14.5 0.0145 E18.5 retina CAGCAGTCCT (2) CTAGATAATT (3) GAAAGGACAG (2) TCAAGATTTT TGCTGGGATT (2) 21.8 0.0218 P0.5 retina CAGCAGTCCT (2) CTAGATAATT (3) 5.9 0.0059 P2.5 retina CCCTTTCAAA TCAAGATTTT TGCTGGGATT (2) 12.4 0.0124 P4.5 retina CAGCACCTCT CAGCAGTCCT (2) CCCTTTCAAA GAAAGGACAG (2) TCAAGATTTT 17.9 0.0179 P6.5 retina CAGCAGTCCT (2) GACCCTGCTT (3) TCAAGATTTT TGCTGGGATT (2) 8.4 0.0084 P10.5 crx- retina CAGCAGTCCT (2) CTAGATAATT (3) GACCCTGCTT (3) TAGAGGCCTG TCAAGATTTT 15 0.015 P10.5 crx+ retina CAGCAGTCCT (2) CTAGATAATT (3) CTTTTATCCT GACCCTGCTT (3) TAGAGGCCTG 9.5 0.0095 Adult retinal CCCTTTCAAA TAGAGGCCTG TGCTGGGATT (2) 7.5 0.0075 ONL CAGCAGTCCT (2) TGCTGGGATT (2) 5.7 0.0057