Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.206206
Ncdn
neurochondrin
4
26562
Mm.206206
AU040320
expressed sequence AU040320
4
100317
Human Homolog
PKD1-like[polycystic kidney disease 1-like]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 77 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTATTTAATT
(
4
)
6.5
0.0065
P8 Cb GC
GAGAAGACAC (
6
)
6.5
0.0065
P8 Cb GC
TGCTGCCACT (
6
)
4.9
0.0049
P8 Cb GC
CTATTTTATT
(
4
)
3.3
0.0033
P8 Cb GC
GCCACACTTG (
7
)
1.6
0.0016
Cb medulloblastoma
GAGAAGACAC (
6
)
27.7
0.0277
Cb medulloblastoma
CTATTTTATT
(
4
)
9.2
0.0092
Cb medulloblastoma
TGCTGCCACT (
6
)
9.2
0.0092
Cb medulloblastoma
CTATTTAATT
(
4
)
6.9
0.0069
Cb medulloblastoma
GCCACACTTG (
7
)
2.3
0.0023
P8 GC+1d culture
GAGAAGACAC (
6
)
10.3
0.0103
P8 GC+1d culture
TGCTGCCACT (
6
)
6.8
0.0068
P8 GC+1d culture
CTATTTTATT
(
4
)
3.4
0.0034
P8 GC+1d culture
CTATTTAATT
(
4
)
2.3
0.0023
P8 GC+1d culture
GCCACACTTG (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GAGAAGACAC (
6
)
8.2
0.0082
P8 GC+SHH+1d culture
TGCTGCCACT (
6
)
7
0.007
P8 GC+SHH+1d culture
CTATTTAATT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
CTATTTTATT
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCACACTTG (
7
)
1.2
0.0012
3T3 fibroblasts
GAGAAGACAC (
6
)
7
0.007
3T3 fibroblasts
TGCTGCCACT (
6
)
7
0.007
3T3 fibroblasts
GCCACACTTG (
7
)
3.5
0.0035
E15 cortex
GCCACACTTG (
7
)
9.9
0.0099
E15 cortex
CTATTTAATT
(
4
)
4.9
0.0049
E15 cortex
GAGAAGACAC (
6
)
4.9
0.0049
E15 cortex
TGCTGCCACT (
6
)
4.9
0.0049
P1 cortex
TGCTGCCACT (
6
)
4.5
0.0045
Hypothalamus
GAGAAGACAC (
6
)
19.9
0.0199
Hypothalamus
TGCTGCCACT (
6
)
7.2
0.0072
Hypothalamus
CTATTTAATT
(
4
)
1.8
0.0018
E12.5 retina
GAGAAGACAC (
6
)
11.3
0.0113
E12.5 retina
CTATTTAATT
(
4
)
3.8
0.0038
E12.5 retina
CTATTTTATT
(
4
)
3.8
0.0038
E12.5 retina
GCCACACTTG (
7
)
1.9
0.0019
E14.5 retina
GAGAAGACAC (
6
)
12.8
0.0128
E14.5 retina
CTATTTAATT
(
4
)
1.8
0.0018
E14.5 retina
CTATTTTATT
(
4
)
1.8
0.0018
E14.5 retina
TGCTGCCACT (
6
)
1.8
0.0018
E16.5 retina
GAGAAGACAC (
6
)
10.9
0.0109
E16.5 retina
CTATTTAATT
(
4
)
3.6
0.0036
E16.5 retina
CTATTTTATT
(
4
)
3.6
0.0036
E16.5 retina
TGCTGCCACT (
6
)
1.8
0.0018
E18.5 retina
TGCTGCCACT (
6
)
16.4
0.0164
E18.5 retina
GAGAAGACAC (
6
)
9.1
0.0091
E18.5 retina
CTATTTAATT
(
4
)
3.6
0.0036
E18.5 retina
CTATTTTATT
(
4
)
1.8
0.0018
E18.5 retina
GCCACACTTG (
7
)
1.8
0.0018
P0.5 retina
GAGAAGACAC (
6
)
7.9
0.0079
P0.5 retina
TGCTGCCACT (
6
)
5.9
0.0059
P0.5 retina
CTATTTAATT
(
4
)
3.9
0.0039
P2.5 retina
GAGAAGACAC (
6
)
17.6
0.0176
P2.5 retina
TGCTGCCACT (
6
)
8.8
0.0088
P2.5 retina
CTATTTAATT
(
4
)
7
0.007
P2.5 retina
CTATTTTATT
(
4
)
1.8
0.0018
P4.5 retina
GAGAAGACAC (
6
)
19.8
0.0198
P4.5 retina
CTATTTAATT
(
4
)
11.9
0.0119
P4.5 retina
TGCTGCCACT (
6
)
7.9
0.0079
P6.5 retina
GAGAAGACAC (
6
)
21.7
0.0217
P6.5 retina
TGCTGCCACT (
6
)
11.7
0.0117
P6.5 retina
CTATTTAATT
(
4
)
5
0.005
P6.5 retina
GCCACACTTG (
7
)
5
0.005
P10.5 crx- retina
GAGAAGACAC (
6
)
7.4
0.0074
P10.5 crx- retina
TGCTGCCACT (
6
)
5.6
0.0056
P10.5 crx- retina
GCCACACTTG (
7
)
3.7
0.0037
P10.5 crx- retina
CTATTTAATT
(
4
)
1.9
0.0019
P10.5 crx+ retina
GAGAAGACAC (
6
)
5.8
0.0058
P10.5 crx+ retina
CTATTTAATT
(
4
)
3.8
0.0038
P10.5 crx+ retina
CTATTTTATT
(
4
)
1.9
0.0019
P10.5 crx+ retina
GCCACACTTG (
7
)
1.9
0.0019
P10.5 crx+ retina
TGCTGCCACT (
6
)
1.9
0.0019
Adult retinal
GAGAAGACAC (
6
)
18.5
0.0185
Adult retinal
GCCACACTTG (
7
)
3.7
0.0037
Adult retinal
TGCTGCCACT (
6
)
1.9
0.0019
ONL
GAGAAGACAC (
6
)
7.7
0.0077
ONL
CTATTTAATT
(
4
)
3.8
0.0038
ONL
TGCTGCCACT (
6
)
1.9
0.0019
