Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.206218	Hdac11	histone deacetylase 11	6		232232
Gene Ontology	chromatin modification | hydrolase activity | nucleus | regulation of transcription, DNA-dependent
Human Homolog	HDAC11[histone deacetylase 11]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTGTGCAT (3) 37.5 0.0375 P8 Cb GC GATTGTTACA (2) 3.3 0.0033 P8 Cb GC AATGGCCCTG (2) 1.6 0.0016 Cb medulloblastoma TGCTGTGCAT (3) 16.2 0.0162 Cb medulloblastoma GCCTCTTTGC (2) 9.2 0.0092 P8 GC+1d culture TGCTGTGCAT (3) 20.5 0.0205 P8 GC+1d culture AATGGCCCTG (2) 5.7 0.0057 P8 GC+1d culture GATTGTTACA (2) 3.4 0.0034 P8 GC+SHH+1d culture TGCTGTGCAT (3) 31.6 0.0316 P8 GC+SHH+1d culture GATTGTTACA (2) 2.3 0.0023 P8 GC+SHH+1d culture AATGGCCCTG (2) 1.2 0.0012 3T3 fibroblasts TGCTGTGCAT (3) 10.5 0.0105 3T3 fibroblasts AATGGCCCTG (2) 3.5 0.0035 E15 cortex AATGGCCCTG (2) 14.8 0.0148 E15 cortex GATTGTTACA (2) 4.9 0.0049 E15 cortex TGCTGTGCAT (3) 4.9 0.0049 P1 cortex TGCTGTGCAT (3) 9.1 0.0091 P1 cortex GATTGTTACA (2) 4.5 0.0045 Hypothalamus TGCTGTGCAT (3) 19.9 0.0199 Hypothalamus ACAGAGGGGT (2) 3.6 0.0036 Hypothalamus GCCTCTTTGC (2) 1.8 0.0018 E12.5 retina TGCTGTGCAT (3) 50.7 0.0507 E12.5 retina GCCTCTTTGC (2) 5.6 0.0056 E12.5 retina AATGGCCCTG (2) 1.9 0.0019 E14.5 retina TGCTGTGCAT (3) 20 0.02 E14.5 retina ACAGAGGGGT (2) 1.8 0.0018 E16.5 retina TGCTGTGCAT (3) 39.8 0.0398 E16.5 retina AATGGCCCTG (2) 3.6 0.0036 E16.5 retina GATTGTTACA (2) 1.8 0.0018 E16.5 retina GCCTCTTTGC (2) 1.8 0.0018 E18.5 retina TGCTGTGCAT (3) 14.6 0.0146 E18.5 retina AATGGCCCTG (2) 1.8 0.0018 P0.5 retina TGCTGTGCAT (3) 25.5 0.0255 P0.5 retina AATGGCCCTG (2) 3.9 0.0039 P0.5 retina GATTGTTACA (2) 3.9 0.0039 P2.5 retina TGCTGTGCAT (3) 51 0.051 P4.5 retina TGCTGTGCAT (3) 21.8 0.0218 P4.5 retina GATTGTTACA (2) 4 0.004 P4.5 retina AATGGCCCTG (2) 2 0.002 P4.5 retina GCCTCTTTGC (2) 2 0.002 P6.5 retina TGCTGTGCAT (3) 41.7 0.0417 P6.5 retina GATTGTTACA (2) 1.7 0.0017 P10.5 crx- retina TGCTGTGCAT (3) 14.9 0.0149 P10.5 crx- retina GCCTCTTTGC (2) 9.3 0.0093 P10.5 crx- retina ACAGAGGGGT (2) 1.9 0.0019 P10.5 crx- retina GATTGTTACA (2) 1.9 0.0019 P10.5 crx+ retina TGCTGTGCAT (3) 48.1 0.0481 P10.5 crx+ retina GATTGTTACA (2) 3.8 0.0038 P10.5 crx+ retina AATGGCCCTG (2) 1.9 0.0019 Adult retinal TGCTGTGCAT (3) 16.7 0.0167 Adult retinal GCCTCTTTGC (2) 7.4 0.0074 Adult retinal AATGGCCCTG (2) 1.9 0.0019 ONL TGCTGTGCAT (3) 21.1 0.0211 ONL AATGGCCCTG (2) 1.9 0.0019