Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.206555
2700038I16Rik
RIKEN cDNA 2700038I16 gene
5
72611
Human Homolog
LOC346365[similar to vav-1 interacting Kruppel-like protein isoform a]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGAAGGGGG (
2
)
TCCTGTAAAT
22.8
0.0228
Cb medulloblastoma
GGGAAGGGGG (
2
)
TCCTGTAAAT
TGGCACAGGC (
2
)
20.8
0.0208
P8 GC+1d culture
GGGAAGGGGG (
2
)
TATATTCTTA
TCCTGTAAAT
36.5
0.0365
P8 GC+SHH+1d culture
GGGAAGGGGG (
2
)
TATATTCTTA
TCCTGTAAAT
22.2
0.0222
E15 cortex
GGGAAGGGGG (
2
)
14.8
0.0148
P1 cortex
GGGAAGGGGG (
2
)
TCCTGTAAAT
22.7
0.0227
Hypothalamus
GGGAAGGGGG (
2
)
TATATTCTTA
TCCTGTAAAT
12.6
0.0126
E12.5 retina
GGGAAGGGGG (
2
)
TCCTGTAAAT
48.8
0.0488
E14.5 retina
GGGAAGGGGG (
2
)
TCCTGTAAAT
71
0.071
E16.5 retina
GGGAAGGGGG (
2
)
TCCTGTAAAT
36.2
0.0362
E18.5 retina
TCCTGTAAAT
81.9
0.0819
P0.5 retina
GGGAAGGGGG (
2
)
TCCTGTAAAT
15.7
0.0157
P2.5 retina
GGGAAGGGGG (
2
)
TCCTGTAAAT
38.7
0.0387
P4.5 retina
GGGAAGGGGG (
2
)
TATATTCTTA
TCCTGTAAAT
45.6
0.0456
P6.5 retina
GGGAAGGGGG (
2
)
TATATTCTTA
TCCTGTAAAT
20
0.02
P10.5 crx- retina
GGGAAGGGGG (
2
)
TCCTGTAAAT
14.8
0.0148
P10.5 crx+ retina
GGGAAGGGGG (
2
)
TCCTGTAAAT
TGGCACAGGC (
2
)
34.5
0.0345
Adult retinal
GGGAAGGGGG (
2
)
TCCTGTAAAT
24.1
0.0241
ONL
GGGAAGGGGG (
2
)
TCCTGTAAAT
28.7
0.0287
