Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.206841	Smc4l1	SMC4 structural maintenance of chromosomes 4-like 1 (yeast)	3		70099
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of substances | cell cycle | chromosome segregation | membrane | mitosis | mitotic chromosome condensation | nucleus | transport
Human Homolog	SMC4L1[SMC4 structural maintenance of chromosomes 4-like 1 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTACAAGTAA GACAGCCTTA GATGAGATTG (2) GTAGCTCACA (3) 24.5 0.0245 Cb medulloblastoma GTAGCTCACA (3) 18.5 0.0185 P8 GC+1d culture GATGAGATTG (2) GTAGCTCACA (3) TACAAGGCCT 31.9 0.0319 P8 GC+SHH+1d culture ATTCCTTCAG (2) CTACAAGTAA GATGAGATTG (2) GTAGCTCACA (3) 24.6 0.0246 3T3 fibroblasts CTACAAGTAA GTAGCTCACA (3) TACAAGGCCT 28 0.028 E15 cortex GATGAGATTG (2) GTAGCTCACA (3) 34.6 0.0346 P1 cortex ACCTATTAAG CCAAAAGCTT (2) GTAGCTCACA (3) 36.3 0.0363 Hypothalamus GTAGCTCACA (3) 29 0.029 E12.5 retina GACAGCCTTA GATGAGATTG (2) GTAGCTCACA (3) 33.8 0.0338 E14.5 retina CTACAAGTAA GTAGCTCACA (3) 32.8 0.0328 E16.5 retina AAGTAAAGGG ATTACGCCAA ATTCCTTCAG (2) CTACAAGTAA GACAGCCTTA GATGAGATTG (2) GTAGCTCACA (3) 56.1 0.0561 E18.5 retina AAGTAAAGGG CTACAAGTAA GACAGCCTTA GATGAGATTG (2) GTAGCTCACA (3) 30.9 0.0309 P0.5 retina ATTACGCCAA GATGAGATTG (2) GTAGCTCACA (3) 29.5 0.0295 P2.5 retina AAGTAAAGGG ATTCCTTCAG (2) CCAAAAGCTT (2) CTACAAGTAA GACAGCCTTA GATGAGATTG (2) GTAGCTCACA (3) 42.4 0.0424 P4.5 retina GACAGCCTTA GATGAGATTG (2) GTAGCTCACA (3) 41.7 0.0417 P6.5 retina GATGAGATTG (2) GTAGCTCACA (3) 20 0.02 P10.5 crx- retina GTAGCTCACA (3) 16.7 0.0167 P10.5 crx+ retina GACAGCCTTA GTAGCTCACA (3) TACAAGGCCT 32.6 0.0326 Adult retinal ATTACGCCAA GATGAGATTG (2) GTAGCTCACA (3) 22.3 0.0223 ONL GATGAGATTG (2) GTAGCTCACA (3) 30.6 0.0306