Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.206949	Snx12	sorting nexin 12	X		55988
Gene Ontology	intracellular signaling cascade | protein transport | transport
Human Homolog	SNX12[sorting nexin 12]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGTAGCTG 1.6 0.0016 P8 Cb GC GACACAGGAA (4) 1.6 0.0016 P8 Cb GC GAGAGCAGCA (5) 1.6 0.0016 P8 Cb GC GCAGCCACTC (5) 1.6 0.0016 P8 Cb GC GCGGGGGGGG (18) 1.6 0.0016 Cb medulloblastoma GAGAGCAGCA (5) 4.6 0.0046 Cb medulloblastoma GCGGGGGGGG (18) 2.3 0.0023 Cb medulloblastoma GGCTCAGCAG (2) 2.3 0.0023 P8 GC+1d culture CTGGTAGCTG 4.6 0.0046 P8 GC+1d culture GAGAGCAGCA (5) 2.3 0.0023 P8 GC+1d culture CACCTTTCTG (3) 1.1 0.0011 P8 GC+SHH+1d culture CTGGTAGCTG 2.3 0.0023 P8 GC+SHH+1d culture GAGAGCAGCA (5) 2.3 0.0023 P8 GC+SHH+1d culture CACCTTTCTG (3) 1.2 0.0012 P8 GC+SHH+1d culture CTCGTAGCTG 1.2 0.0012 3T3 fibroblasts GAGAGCAGCA (5) 10.5 0.0105 3T3 fibroblasts CTCGTAGCTG 3.5 0.0035 E15 cortex CTGGTAGCTG 4.9 0.0049 P1 cortex CTGGTAGCTG 9.1 0.0091 P1 cortex GAGAGCAGCA (5) 4.5 0.0045 Hypothalamus GAGAGCAGCA (5) 1.8 0.0018 Hypothalamus GGCTCAGCAG (2) 1.8 0.0018 E12.5 retina GCAGCCACTC (5) 1.9 0.0019 E12.5 retina GCGGGGGGGG (18) 1.9 0.0019 E12.5 retina GGCTCAGGAA (7) 1.9 0.0019 E14.5 retina GAGAGCAGCA (5) 1.8 0.0018 E16.5 retina CTGGTAGCTG 1.8 0.0018 E16.5 retina GGCTCAGCAG (2) 1.8 0.0018 E16.5 retina GGCTCAGGAA (7) 1.8 0.0018 E18.5 retina CTGGTAGCTG 5.5 0.0055 E18.5 retina GAGAGCAGCA (5) 1.8 0.0018 E18.5 retina GCAGCCACTC (5) 1.8 0.0018 E18.5 retina GGCTCAGGAA (7) 1.8 0.0018 P0.5 retina CTGGTAGCTG 5.9 0.0059 P0.5 retina GAGAGCAGCA (5) 5.9 0.0059 P0.5 retina CACCTTTCTG (3) 2 0.002 P0.5 retina GGCTCAGCAG (2) 2 0.002 P2.5 retina CTGGTAGCTG 3.5 0.0035 P2.5 retina GGCTCAGGAA (7) 3.5 0.0035 P2.5 retina GAGAGCAGCA (5) 1.8 0.0018 P4.5 retina GGCTCAGGAA (7) 4 0.004 P4.5 retina CTGGTAGCTG 2 0.002 P6.5 retina CTGGTAGCTG 3.3 0.0033 P6.5 retina GGCTCAGGAA (7) 3.3 0.0033 P6.5 retina CTCGTAGCTG 1.7 0.0017 P6.5 retina GCGGGGGGGG (18) 1.7 0.0017 P10.5 crx- retina GAGAGCAGCA (5) 3.7 0.0037 P10.5 crx- retina GACACAGGAA (4) 1.9 0.0019 P10.5 crx+ retina GAGAGCAGCA (5) 5.8 0.0058 P10.5 crx+ retina GCGGGGGGGG (18) 1.9 0.0019 Adult retinal GAGAGCAGCA (5) 25.9 0.0259 Adult retinal GACACAGGAA (4) 3.7 0.0037 Adult retinal CTGGTAGCTG 1.9 0.0019 Adult retinal GGCTCAGCAG (2) 1.9 0.0019 ONL GAGAGCAGCA (5) 19.2 0.0192 ONL CTGGTAGCTG 3.8 0.0038