Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.207004	Prkaa1	protein kinase, AMP-activated, alpha 1 catalytic subunit	15		105787
Gene Ontology	fatty acid oxidation | glucose metabolism | kinase activity
Human Homolog	PRKAA1[protein kinase, AMP-activated, alpha 1 catalytic subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 25 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGGAACTT (3) 1.6 0.0016 Cb medulloblastoma GTGATGGAAT (4) 9.2 0.0092 Cb medulloblastoma AAAGGAACTT (3) 2.3 0.0023 Cb medulloblastoma TATATATACA (6) 2.3 0.0023 P8 GC+1d culture TATATATACA (6) 1.1 0.0011 P8 GC+SHH+1d culture TATATATACA (6) 1.2 0.0012 P8 GC+SHH+1d culture TTAAGAAAAA (11) 1.2 0.0012 P1 cortex AGAAATCAAC 4.5 0.0045 P1 cortex GTGATGGAAT (4) 4.5 0.0045 Hypothalamus GTGATGGAAT (4) 3.6 0.0036 Hypothalamus GTTTGGGGGG (5) 3.6 0.0036 Hypothalamus AAAGGAACTT (3) 1.8 0.0018 E12.5 retina AAAGGAACTT (3) 1.9 0.0019 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E18.5 retina AGAAATCAAC 1.8 0.0018 P0.5 retina AAAGGAACTT (3) 2 0.002 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina GTTTGGGGGG (5) 2 0.002 P2.5 retina AAAGGAACTT (3) 3.5 0.0035 P2.5 retina TTAAGAAAAA (11) 1.8 0.0018 P10.5 crx- retina AAAGGAACTT (3) 1.9 0.0019 P10.5 crx+ retina AGAAATCAAC 1.9 0.0019 P10.5 crx+ retina TATATATACA (6) 1.9 0.0019 Adult retinal ATTACGCCAA (233) 3.7 0.0037 ONL TTAAGAAAAA (11) 1.9 0.0019