Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.207052	Atp6v0b	ATPase, H+ transporting, V0 subunit B	4		114143
Gene Ontology	ATP biosynthesis | ATP hydrolysis coupled proton transport | ATP synthesis coupled proton transport | ATPase activity | endosome | hydrogen ion transporter activity | hydrogen transport | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-translocating V-type ATPase complex | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | integral to membrane | integral to membrane | ion transport | membrane | proton transport | proton-transporting two-sector ATPase complex | transport | transporter activity | vacuolar membrane
Human Homolog	ATP6V0B[ATPase, H+ transporting, lysosomal 21kDa, V0 subunit c'']
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGGGGCTG (6) 4.9 0.0049 P8 Cb GC AGACAAAAAA (18) 3.3 0.0033 P8 Cb GC GGTTTCCTGA (8) 1.6 0.0016 Cb medulloblastoma TTTGGGGCTG (6) 18.5 0.0185 Cb medulloblastoma AGACAAAAAA (18) 13.9 0.0139 Cb medulloblastoma GGCTGGATGG (3) 9.2 0.0092 Cb medulloblastoma GCCTGGGCTC (6) 2.3 0.0023 Cb medulloblastoma GGTTTCCTGA (8) 2.3 0.0023 Cb medulloblastoma GTGATGCTAA (3) 2.3 0.0023 P8 GC+1d culture TTTGGGGCTG (6) 17.1 0.0171 P8 GC+1d culture AGACAAAAAA (18) 6.8 0.0068 P8 GC+1d culture GGCTGAGCCT (8) 3.4 0.0034 P8 GC+1d culture GCCTCCTTGG (5) 1.1 0.0011 P8 GC+SHH+1d culture TTTGGGGCTG (6) 8.2 0.0082 P8 GC+SHH+1d culture AGACAAAAAA (18) 7 0.007 P8 GC+SHH+1d culture GAGGGCTCGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GCCTGGGCTC (6) 1.2 0.0012 P8 GC+SHH+1d culture GCTGAGCATT (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCTGGATGG (3) 1.2 0.0012 3T3 fibroblasts TTTGGGGCTG (6) 14 0.014 3T3 fibroblasts GTCGTTGTGG 7 0.007 3T3 fibroblasts GCCTGGGCTC (6) 3.5 0.0035 3T3 fibroblasts GGCTGAGCCT (8) 3.5 0.0035 E15 cortex TTTGGGGCTG (6) 9.9 0.0099 E15 cortex GTGATGCTAA (3) 4.9 0.0049 P1 cortex AGACAAAAAA (18) 18.2 0.0182 P1 cortex TTTGGGGCTG (6) 13.6 0.0136 P1 cortex GGCTGGATGG (3) 9.1 0.0091 P1 cortex GCCTCCTTGG (5) 4.5 0.0045 P1 cortex GGTTTCCTGA (8) 4.5 0.0045 Hypothalamus TTTGGGGCTG (6) 14.5 0.0145 Hypothalamus AGACAAAAAA (18) 10.9 0.0109 Hypothalamus GGCTGGATGG (3) 9.1 0.0091 Hypothalamus GCCTGGGCTC (6) 1.8 0.0018 Hypothalamus GGCTGAGCCT (8) 1.8 0.0018 E12.5 retina AGACAAAAAA (18) 9.4 0.0094 E12.5 retina TTTGGGGCTG (6) 3.8 0.0038 E12.5 retina GGCTGAGCCT (8) 1.9 0.0019 E12.5 retina GTGATGCTAA (3) 1.9 0.0019 E14.5 retina AGACAAAAAA (18) 5.5 0.0055 E14.5 retina GGCTGAGCCT (8) 3.6 0.0036 E14.5 retina TTTGGGGCTG (6) 3.6 0.0036 E14.5 retina GCCTGGGCTC (6) 1.8 0.0018 E14.5 retina GTGCTCTGGG (5) 1.8 0.0018 E16.5 retina GTGCTCTGGG (5) 3.6 0.0036 E16.5 retina AGACAAAAAA (18) 1.8 0.0018 E16.5 retina GCCTGGGCTC (6) 1.8 0.0018 E16.5 retina TTTGGGGCTG (6) 1.8 0.0018 E18.5 retina AGACAAAAAA (18) 9.1 0.0091 E18.5 retina TTTGGGGCTG (6) 3.6 0.0036 E18.5 retina GCCTGGGCTC (6) 1.8 0.0018 P0.5 retina TTTGGGGCTG (6) 17.7 0.0177 P0.5 retina AGACAAAAAA (18) 2 0.002 P0.5 retina GTCGTTGTGG 2 0.002 P2.5 retina AGACAAAAAA (18) 7 0.007 P2.5 retina GCCTGGGCTC (6) 3.5 0.0035 P2.5 retina TTTGGGGCTG (6) 3.5 0.0035 P2.5 retina GAGGGCTCGG (3) 1.8 0.0018 P2.5 retina GCCTCCTTGG (5) 1.8 0.0018 P2.5 retina GTGATGCTAA (3) 1.8 0.0018 P2.5 retina TTGGGGCTGG (2) 1.8 0.0018 P4.5 retina AGACAAAAAA (18) 7.9 0.0079 P4.5 retina TTTGGGGCTG (6) 7.9 0.0079 P4.5 retina GCTGAGCATT (2) 2 0.002 P4.5 retina GGCTGAGCCT (8) 2 0.002 P4.5 retina GTGATGCTAA (3) 2 0.002 P6.5 retina AGACAAAAAA (18) 15 0.015 P6.5 retina TTTGGGGCTG (6) 11.7 0.0117 P6.5 retina GAGGGCTCGG (3) 1.7 0.0017 P6.5 retina GCCTCCTTGG (5) 1.7 0.0017 P6.5 retina GCCTGGGCTC (6) 1.7 0.0017 P6.5 retina GGCTGAGCCT (8) 1.7 0.0017 P6.5 retina GTCGTTGTGG 1.7 0.0017 P6.5 retina TTTGGGGTTG 1.7 0.0017 P10.5 crx- retina TTTGGGGCTG (6) 63.2 0.0632 P10.5 crx- retina GGCTGAGCCT (8) 5.6 0.0056 P10.5 crx- retina AGACAAAAAA (18) 3.7 0.0037 P10.5 crx- retina GTCGTTGTGG 3.7 0.0037 P10.5 crx- retina TTTGGGGTTG 1.9 0.0019 P10.5 crx+ retina TTTGGGGCTG (6) 15.4 0.0154 P10.5 crx+ retina AGACAAAAAA (18) 11.5 0.0115 P10.5 crx+ retina GCCTCCTTGG (5) 1.9 0.0019 P10.5 crx+ retina GCCTGGGCTC (6) 1.9 0.0019 P10.5 crx+ retina GGCTGAGCCT (8) 1.9 0.0019 P10.5 crx+ retina TTGGGGCTGG (2) 1.9 0.0019 Adult retinal AGACAAAAAA (18) 38.9 0.0389 Adult retinal TTTGGGGCTG (6) 31.5 0.0315 Adult retinal GCCTGGGCTC (6) 1.9 0.0019 Adult retinal GGCTGGATGG (3) 1.9 0.0019 Adult retinal TTTGGGGTTG 1.9 0.0019 ONL AGACAAAAAA (18) 57.5 0.0575 ONL TTTGGGGCTG (6) 19.2 0.0192 ONL GGCTGAGCCT (8) 3.8 0.0038 ONL TTGGGGCTGG (2) 3.8 0.0038 ONL GCCTCCTTGG (5) 1.9 0.0019 ONL GCTGAGCATT (2) 1.9 0.0019 ONL GTCGTTGTGG 1.9 0.0019 ONL GTGATGCTAA (3) 1.9 0.0019