Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.207496	A130082F03Rik	RIKEN cDNA A130082F03 gene	7		319718
Mm.207496	Prkcb1	protein kinase C, beta 1	7	7 60.0 cM	18751
Gene Ontology	ATP binding | calcium channel regulator activity | calcium ion binding | calcium ion homeostasis | calcium ion transport | cytoplasm | intracellular signaling cascade | nucleus | protein amino acid phosphorylation | protein amino acid phosphorylation | protein binding | protein kinase activity | protein kinase C activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	PRKCB1[protein kinase C, beta 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCGGTATTT (2) 4.9 0.0049 P8 Cb GC TGACCCTTGC (3) 1.6 0.0016 Cb medulloblastoma ACCGGTATTT (2) 11.6 0.0116 Cb medulloblastoma ATGGGTGCAT (2) 4.6 0.0046 Cb medulloblastoma GTCACTCTAG (2) 4.6 0.0046 Cb medulloblastoma TGACCCTTGC (3) 2.3 0.0023 Cb medulloblastoma TGTAACAAAG (5) 2.3 0.0023 P8 GC+1d culture ACCGGTATTT (2) 14.8 0.0148 P8 GC+1d culture GTCACTCTAG (2) 4.6 0.0046 P8 GC+1d culture ATGGGTGCAT (2) 2.3 0.0023 P8 GC+1d culture GCTATTTGCC (2) 2.3 0.0023 P8 GC+1d culture TGGTTCCAGG (2) 1.1 0.0011 P8 GC+SHH+1d culture ACCGGTATTT (2) 5.9 0.0059 P8 GC+SHH+1d culture ATGGGTGCAT (2) 2.3 0.0023 P8 GC+SHH+1d culture GCTATTTGCC (2) 2.3 0.0023 P8 GC+SHH+1d culture GTCACTCTAG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGACCCTTGC (3) 1.2 0.0012 P8 GC+SHH+1d culture TGGTTCCAGG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTAACAAAG (5) 1.2 0.0012 3T3 fibroblasts TGACCCTTGC (3) 3.5 0.0035 E15 cortex CGTTTTTCCG (2) 9.9 0.0099 P1 cortex ACCGGTATTT (2) 13.6 0.0136 P1 cortex GTCACTCTAG (2) 13.6 0.0136 Hypothalamus ACCGGTATTT (2) 5.4 0.0054 Hypothalamus TGACCCTTGC (3) 1.8 0.0018 E14.5 retina CGTTTTTCCG (2) 1.8 0.0018 E14.5 retina GTCACTCTAG (2) 1.8 0.0018 E16.5 retina TGACCCTTGC (3) 1.8 0.0018 P0.5 retina TGTAACAAAG (5) 2 0.002 P2.5 retina ACCGGTATTT (2) 1.8 0.0018 P2.5 retina GCTATTTGCC (2) 1.8 0.0018 P2.5 retina GTCACTCTAG (2) 1.8 0.0018 P2.5 retina TGTAACAAAG (5) 1.8 0.0018 P4.5 retina ACCGGTATTT (2) 2 0.002 P4.5 retina ATGGGTGCAT (2) 2 0.002 P6.5 retina ACCGGTATTT (2) 1.7 0.0017 P6.5 retina GTCACTCTAG (2) 1.7 0.0017 P10.5 crx- retina ACCGGTATTT (2) 11.1 0.0111 P10.5 crx- retina ATGGGTGCAT (2) 1.9 0.0019 P10.5 crx+ retina ACCGGTATTT (2) 11.5 0.0115 P10.5 crx+ retina TGGTTCCAGG (2) 1.9 0.0019 Adult retinal ACCGGTATTT (2) 1.9 0.0019