Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.208445
A930031D07Rik
RIKEN cDNA A930031D07 gene
1
213006
Human Homolog
DKFZp761N1114[hypothetical protein DKFZp761N1114]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
GTTTTACTTC
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
AGAAAGAATT
(
2
)
1.1
0.0011
P8 GC+1d culture
ATTTGTCTCT (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
ATTTGTCTCT (
2
)
3.5
0.0035
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
ATTTGTCTCT (
2
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
AGAAAGAATT
(
2
)
4.5
0.0045
P1 cortex
GTTTTACTTC
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
ATTTGTCTCT (
2
)
3.8
0.0038
E12.5 retina
GTATTCTCTG (
2
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
GGCCTAAGCA (
6
)
3.6
0.0036
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
ATTTGTCTCT (
2
)
2
0.002
P0.5 retina
GGCCTAAGCA (
6
)
2
0.002
P0.5 retina
GTATTCTCTG (
2
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
GGCCTAAGCA (
6
)
3.5
0.0035
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
GGCCTAAGCA (
6
)
3.3
0.0033
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
GGCCTAAGCA (
6
)
1.9
0.0019
P10.5 crx- retina
GTTTTACTTC
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
AGAAAGAATT
(
2
)
1.9
0.0019
Adult retinal
GTATTCTCTG (
2
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
ATTTGTCTCT (
2
)
1.9
0.0019
