Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.208619
5730470L24Rik
RIKEN cDNA 5730470L24 gene
3
66641
Human Homolog
FLJ21168[hypothetical protein FLJ21168]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 74 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGAAAAAAAA (
47
)
17.9
0.0179
P8 Cb GC
CCTGTAATCC (
34
)
6.5
0.0065
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
AGCAAGTACC
(
4
)
3.3
0.0033
P8 Cb GC
GGAAACAAAA (
11
)
1.6
0.0016
P8 Cb GC
TCTAAATATA
(
5
)
1.6
0.0016
Cb medulloblastoma
AGAAAAAAAA (
47
)
53.2
0.0532
Cb medulloblastoma
CCTGTAATCC (
34
)
11.6
0.0116
Cb medulloblastoma
AGCAAGTACC
(
4
)
2.3
0.0023
Cb medulloblastoma
GGAAACAAAA (
11
)
2.3
0.0023
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
AGAAAAAAAA (
47
)
8
0.008
P8 GC+1d culture
CCTGTAATCC (
34
)
1.1
0.0011
P8 GC+1d culture
GTGTCCCTTT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AGAAAAAAAA (
47
)
14.1
0.0141
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
CCTGTAATCC (
34
)
4.7
0.0047
P8 GC+SHH+1d culture
TCTAAATATA
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGTCCCTTT
(
2
)
1.2
0.0012
3T3 fibroblasts
CCTGTAATCC (
34
)
10.5
0.0105
3T3 fibroblasts
AGAAAAAAAA (
47
)
3.5
0.0035
E15 cortex
AGAAAAAAAA (
47
)
14.8
0.0148
E15 cortex
CCTGTAATCC (
34
)
4.9
0.0049
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
CCTGTAATCC (
34
)
13.6
0.0136
P1 cortex
AGAAAAAAAA (
47
)
9.1
0.0091
P1 cortex
GGAAACAAAA (
11
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
AGAAAAAAAA (
47
)
32.6
0.0326
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
CCTGTAATCC (
34
)
5.4
0.0054
E12.5 retina
AGAAAAAAAA (
47
)
20.7
0.0207
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
CCTGTAATCC (
34
)
3.8
0.0038
E12.5 retina
GTGTCCCTTT
(
2
)
1.9
0.0019
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
AGAAAAAAAA (
47
)
20
0.02
E14.5 retina
CCTGTAATCC (
34
)
5.5
0.0055
E14.5 retina
GTGTCCCTTT
(
2
)
3.6
0.0036
E14.5 retina
GTTTCCCTTT
(
7
)
1.8
0.0018
E16.5 retina
AGAAAAAAAA (
47
)
10.9
0.0109
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
CCTGTAATCC (
34
)
3.6
0.0036
E16.5 retina
GGAAACAAAA (
11
)
1.8
0.0018
E18.5 retina
AGAAAAAAAA (
47
)
29.1
0.0291
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
GGAAACAAAA (
11
)
3.6
0.0036
E18.5 retina
CCTGTAATCC (
34
)
1.8
0.0018
P0.5 retina
AGAAAAAAAA (
47
)
13.7
0.0137
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
CCTGTAATCC (
34
)
3.9
0.0039
P2.5 retina
AGAAAAAAAA (
47
)
17.6
0.0176
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
CCTGTAATCC (
34
)
3.5
0.0035
P2.5 retina
GTTTCCCTTT
(
7
)
1.8
0.0018
P4.5 retina
AGAAAAAAAA (
47
)
31.7
0.0317
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
CCTGTAATCC (
34
)
5.9
0.0059
P6.5 retina
AGAAAAAAAA (
47
)
13.3
0.0133
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
CCTGTAATCC (
34
)
1.7
0.0017
P6.5 retina
TCTAAATATA
(
5
)
1.7
0.0017
P10.5 crx- retina
AGAAAAAAAA (
47
)
7.4
0.0074
P10.5 crx- retina
CCTGTAATCC (
34
)
3.7
0.0037
P10.5 crx+ retina
AGAAAAAAAA (
47
)
5.8
0.0058
P10.5 crx+ retina
CCTGTAATCC (
34
)
3.8
0.0038
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
AGAAAAAAAA (
47
)
5.6
0.0056
Adult retinal
CCTGTAATCC (
34
)
3.7
0.0037
ONL
AGAAAAAAAA (
47
)
19.2
0.0192
ONL
CCTGTAATCC (
34
)
3.8
0.0038
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
