Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20873	Tnrc11	trinucleotide repeat containing 11 (THR-associated protein)	X		59024
Gene Ontology	ATP binding | DNA binding | DNA metabolism | DNA topoisomerase (ATP-hydrolyzing) activity | DNA topological change
Human Homolog	TNRC11[trinucleotide repeat containing 11 (THR-associated protein, 230kDa subunit)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGGAGGGG (4) 1.6 0.0016 P8 Cb GC GAGGAAAAAA (8) 1.6 0.0016 Cb medulloblastoma CTGGGAGGGG (4) 9.2 0.0092 Cb medulloblastoma ACTCCGTTGA 2.3 0.0023 P8 GC+1d culture CTGGGAGGGG (4) 2.3 0.0023 P8 GC+1d culture ACTCCGTTGA 1.1 0.0011 P8 GC+SHH+1d culture ACTCCGTTGA 2.3 0.0023 P8 GC+SHH+1d culture CTGGGAGGGG (4) 1.2 0.0012 P8 GC+SHH+1d culture GAGGAAAAAA (8) 1.2 0.0012 3T3 fibroblasts ACTCCGTTGA 7 0.007 E15 cortex ACTCCGTTGA 9.9 0.0099 E15 cortex CTGGGAGGGG (4) 4.9 0.0049 P1 cortex CTGGGAGGGG (4) 22.7 0.0227 Hypothalamus CTGGGAGGGG (4) 1.8 0.0018 E12.5 retina ACTCCGTTGA 1.9 0.0019 E12.5 retina CTGGGAGGGG (4) 1.9 0.0019 E12.5 retina GAGGAAAAAA (8) 1.9 0.0019 E14.5 retina CTGGGAGGGG (4) 1.8 0.0018 E14.5 retina GAGGAAAAAA (8) 1.8 0.0018 E16.5 retina CTGGGAGGGG (4) 5.4 0.0054 E16.5 retina GAGGAAAAAA (8) 1.8 0.0018 E18.5 retina GAGGAAAACA (5) 3.6 0.0036 E18.5 retina ACTCCGTTGA 1.8 0.0018 P0.5 retina ACTCCGTTGA 2 0.002 P0.5 retina CTGGGAGGGG (4) 2 0.002 P2.5 retina ACTCCGTTGA 3.5 0.0035 P2.5 retina CTGGGAGGGG (4) 1.8 0.0018 P2.5 retina GAGGAAAAAA (8) 1.8 0.0018 P4.5 retina CTGGGAGGGG (4) 2 0.002 P6.5 retina CTGGGAGGGG (4) 6.7 0.0067 P6.5 retina ACTCCGTTGA 5 0.005 P6.5 retina GAGGAAAAAA (8) 1.7 0.0017 Adult retinal CTGGGAGGGG (4) 11.1 0.0111 Adult retinal GAGGAAAAAA (8) 1.9 0.0019 ONL GAGGAAAAAA (8) 1.9 0.0019 ONL GAGGAAAACA (5) 1.9 0.0019