Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.208750
6720456H09Rik
RIKEN cDNA 6720456H09 gene
12
77895
Mm.208750
AI413782
expressed sequence AI413782
12
12 D2
104799
Mm.208750
9330175H22Rik
RIKEN cDNA 9330175H22 gene
12
319241
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 4 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 20 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTACACTCC
(
3
)
11.4
0.0114
Cb medulloblastoma
CCTACACTCC
(
3
)
6.9
0.0069
P8 GC+1d culture
CCTACACTCC
(
3
)
6.8
0.0068
P8 GC+SHH+1d culture
CCTACACTCC
(
3
)
4.7
0.0047
P1 cortex
CCTACACTCC
(
3
)
4.5
0.0045
Hypothalamus
CCTACACTCC
(
3
)
1.8
0.0018
E12.5 retina
CCTACACTCC
(
3
)
7.5
0.0075
E14.5 retina
CCTACACTCC
(
3
)
TAAGGGTGTT
(
3
)
10.9
0.0109
E16.5 retina
CCTACACTCC
(
3
)
16.3
0.0163
E18.5 retina
CCTACACTCC
(
3
)
7.3
0.0073
P2.5 retina
CCTACACTCC
(
3
)
12.3
0.0123
P4.5 retina
CCTACACTCC
(
3
)
TAAGGGTGTT
(
3
)
17.9
0.0179
P6.5 retina
CCTACACTCC
(
3
)
TAAGGGTGTT
(
3
)
20
0.02
P10.5 crx- retina
CCTACACTCC
(
3
)
1.9
0.0019
P10.5 crx+ retina
CCTACACTCC
(
3
)
5.8
0.0058
Adult retinal
CCTACACTCC
(
3
)
1.9
0.0019
ONL
CCTACACTCC
(
3
)
3.8
0.0038
